Gene Phep_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0306 
Symbol 
ID8251391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp358314 
End bp359759 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content42% 
IMG OID644933955 
Producthypothetical protein 
Protein accessionYP_003090593 
Protein GI255530221 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.496684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00317558 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAT ATACGATATA CTTCTTCCTT TTCATGGCCA TTGCCGGTGT TGGATGTAAT 
AAATATCTTG ATCATGCTCC TGATGATCGT ACCAAATTAA ATACGCCCAC TAAAGTTGCT
GAGCTATTGG TTACTGCTTA TCCACGAGGT AATGCTGTTT TATTGTCCGA ATCTATGTCC
GATATTCCGG CATTTGTGAG TGCCCTTGGA ATAGACTTCC CGGTAAACCA GAATGGCTAT
TACTGGAAGG ATGTAGAGGC TGTTGATCAG GATAGCCCAA CATATTACTG GAACGCTTGT
TACACTGCAA TTGCAACGGC CAATCAGGCC TTGGATGCAA TTGAAAAAGC CTCGGATCCC
CAGCAATATG CTGCGCAAAA AGGTGAGGCC CTGGTTGCAA GGGCGTATGC ACATTTTATG
CTGGTAACGT TTTTCTCGAA ATGTTATGAC CCTGCAACAG CAGAAACCGA TCCCGGTATT
CCTTACGTCA CCACGCCGGA ATCGGTTGTT TTTAAAAGCT ACGAGCGTAA AACAGTGGCT
TATACTTATC AGCAAATTGA AAAGGATCTG TTGGAGGGTA TTCCACTGAT ACAGGATAAA
TACACGGTTC CTGCTTACCA TTTTACCCGT AAGGCCGCCT ATGCTTTTGC CTGCCGGTAT
TATCTGTTTA AAAAAAATAT GGACAAAGTG ATTGAGTATG CCAACCTTAC CTTTCCGGCA
AATAATTTTG CAGATAATGT AAGGCCATGG AAATCTTATG CTGCCTACAA TGTCCAGGAA
TTGGAAACGG CTTATATGAA TGCTGGTAAT CCTGGCAACC TCTTGATCGG GGAAACTGTC
TCGCGTTTGG CCAGAAACTA TAAAAGGCCG ATATATTCGA TCAGCCAGAA CCGTTTAAGG
ATCATATTGG CACCTGTAGG GGTAACATTT ACTGCATTAC CTATTTATTC CAACAGCTCA
ACCTATTATT ACCTGATCAA ATTTGCTGAA CATTTTGTGC GTACCAGCAT CAATGCTTCC
AGTGGCACCG GCTATACTAT GGTACCTTTG TTAACCACCG AAGAGGTTTT GTTAAACCGT
GCTGAGGCTT ATATTGTACA GGGTAAATAT ACAGAGGCGC TGGCGGATAT GAATACAATG
ATCAGTACCC GCGTAACTGC CTATAGCCCG TCTGCAAATG ACTTAACCGA AGCAAAAATA
AAAAGCTATT ATGCCAATGT AACCACTGAT ACCAAGCAGG CCTATATCAA TGCGCTACTG
GATATTAAAA AAGCTGAATT TGTACATGAA GGGATGCGCT GGCTGGATAT TTTAAGACAT
AAATTACCGG TAGTTCACCG TGATGCCGCT GGTAACGAAT TTAATTTAGC TGCCGAGGAT
AAACGGAAAG TATTGCAGAT CCCTTCACAG GTTACTTTAT CAGGTGTTGA ACAAAATCCA
CGTTAA
 
Protein sequence
MKKYTIYFFL FMAIAGVGCN KYLDHAPDDR TKLNTPTKVA ELLVTAYPRG NAVLLSESMS 
DIPAFVSALG IDFPVNQNGY YWKDVEAVDQ DSPTYYWNAC YTAIATANQA LDAIEKASDP
QQYAAQKGEA LVARAYAHFM LVTFFSKCYD PATAETDPGI PYVTTPESVV FKSYERKTVA
YTYQQIEKDL LEGIPLIQDK YTVPAYHFTR KAAYAFACRY YLFKKNMDKV IEYANLTFPA
NNFADNVRPW KSYAAYNVQE LETAYMNAGN PGNLLIGETV SRLARNYKRP IYSISQNRLR
IILAPVGVTF TALPIYSNSS TYYYLIKFAE HFVRTSINAS SGTGYTMVPL LTTEEVLLNR
AEAYIVQGKY TEALADMNTM ISTRVTAYSP SANDLTEAKI KSYYANVTTD TKQAYINALL
DIKKAEFVHE GMRWLDILRH KLPVVHRDAA GNEFNLAAED KRKVLQIPSQ VTLSGVEQNP
R