| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0305 |
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| Symbol | |
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| ID | 8251390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 354622 |
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| End bp | 358281 |
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| Gene Length | 3660 bp |
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| Protein Length | 1219 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644933954 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003090592 |
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| Protein GI | 255530220 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.146192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000760936 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGATT ATTCACATTC AATAACGGGC TTTATTGCTC ATTTCTTTTC TGGTTTTGAC
CGAAAAAGAA CAGTCATTGG AATAAAAAAA CTGATCCTGA TGATGAAATT AACTGCTATT
GTTATTCTGG CCCTGACCTT CCAGGCAACA GCCTCCAGCT TTGCCCAGAA AGTCAGTATC
TCAAAACGTG GGGCCAGTTT AAAAGAACTA TTTAAAGAAA TACGCCGGCA AACCGGTTAC
GATTTCATTT ATAACAATGA AGTCATTGAA CGCGCAGGAA CCGTGAGCGT TCAGGTAAAA
GAAAAAGACG TTTCTGAAGT GCTGATAAAT GTATTCAGTT TAAAACGCCT TTCTTTTGCT
ATTGAAGACA AAAATATTAT CGTAAAAGTA AGAGATGCAG CTCCCGAAAG GATCATTAAC
GGTAAAATTG TGGCTGAAGA AGATGGCTTG CCATTGCCAG GCGTATCCAT TAAAGTTAAA
GGCTCCACAA AATCGACTTC AACCAATTCG AACGGGGAAT TTTCCATAAG TGTAAATGAA
GGAGATGTGC TGTTGGTATC AATGATTGGT TACGTTATGC AGGAAATCAG TACCAATGGG
AAAAACAATG TTAATGTACG TTTACGGCAG GATACCAAAG CCTTATCTGA AGTGGTGGTT
ACGGGTTTTC AGAACATCAA TAAAAAACTA TTTACGGGAT CGGCTACAAC CATCACCGGT
ACAGATGTAA AGCAGGATGG TGTGATAGAC ATTAGCCGGA TGCTGGAAGG TAAAGTTGCC
GGTGTTTCGG TACAAAACGT ATCGGGAACT TTTGGTACGG CACCAAAAAT CCGTGTACGT
GGAGCAACTT CTATATCAGG AGAAAATAAA CCATTGTGGG TTATTGACGG GGTAGTACTG
GAGGATGTGG TGAACATTTC CAATGACCAG CTATCCAGTG GGGATGCGAC TACGTTATTG
GGCTCATCAG TAGCAGGGAT CAATGCGGAC GACATAGAAA GCTTTAATAT TTTGAAAGAT
GCATCTGCTA CAGCTTTGTA TGGTGCCAGG GCTATGAATG GCGTAGTGGT AATTACGACT
AAAAAAGGTC GTTCAGGAAA TACACAGGTT AGTTACAGCG GTAACTTTTC TTCTTTTTTG
AAGCCGAGCT ATAATTCCTT CAACATCATG AACTCTGCTG ATCAGATGTC GCTTTATGCA
GAGATTTACC GTAAAGGCGG GTTCTCTCCC AATATAGTGA ATGATATGAA TGGTGGTGTA
TTTGCTAAAA TGTACCAGAA AATTAACGCC TATGATGCCA GTTTGGGTAA ATTCGGTGTT
GAAAACACAC CCGAAGGTCG CTCAGCCTAT TTAAAAAGAT ACGCCTTAGC CAATACAGAC
TGGTTTGATG TGCTTTTTAA AAACTCATTT GTTCAGGAAC ATTCAGTGAG CATTTCATCC
GGATCAGAAA AATCTCAGCA TTATTTTTCT GTAGGTTATT ACGACGACAA AGGCTGGACC
CTTGCCGATC AGGCCAAACG TTATACTATG AATTTAAGAG GTAACTACAC ACTTTCTCCT
AAATTGAGCG TAGGGATATT GGGAACAGGA GCTTTAAGGA AACAGCGGGC TCCTGGAACA
CTTGGCCGTA CCAGTAATGT GGTAGAAGGA AAATATACCA GAGATTTTGA TATCAATCCT
TTTAGCTATG CCTTAAATAC CAGCAGAACA TTAACACCTT ACGATGAGCA GGGTAATTTG
GAATATTTTA CCCGCAACTA TGCGCCTTTC AACATTATTC AGGAATTGGA CAACAACTAT
ATTGACCTGG ATATGATGGA TATGAAATTG CAGGGCGAAC TAAATTACAA ATTCATTAAG
AACTTCGAAT TTAAGTCGGT TGCTGCGCTG CGTTATGTTA AAACCACACG CGAACATAAA
ATAACCGAAT ATTCAAATAT GGCAAATGCC TATAGGTTTA TGCCCAATTC AACTATTGCA
AACAACAATA TATTTTTATA TGACGACCCG GATCAGCCAC AGCTGATCGA CAAAGAAAGT
GTTTTGCCGC AGGGTGGTTT TTACAACAGG AATGACGATA ACCTGATGAG TTATGACATC
AGGAACCAGG TTGACTGGAA GCAAAAATTT GGCAAGCACG ATGTTGGTGC GTTTATCGGA
CAACAAACCA AATTTGCTGA TCGTCAGAAT AGTTTCAGCA ATGGATATGG GTATCAATAT
GACAAGGGAG GTGTACCATT TACGGATTAC CGGATCATTA AGATGTTGTT GGAAGGGAAC
TACAACTATT ATGGGATGAA TAGGTTCTAC GATCGGTATG CTGCGTTTTT CCTAAATGCC
AATTATGCTT ACGACTCCAA ATATATATTT AACGGAACAG TAAGATATGA TGGCAGTAAC
CGCATGGGCG AATCTGCTAC AGCCAGATGG CTGCCTACCT GGACATTAAG TGCAGCGTGG
AATGTTGATC AGGAAGATTT TATAAAGCAA ATAGAACAGG TCAGTTATTT AAAATTGCGT
GGTGGCTATG GCTTAACTGC CAGTCTGGGG GATGCAACCA ATTCTTCCGT GGTGCTTAAA
AACAGTACGA CCCTTCGTCC AAGATTATCG GAAGTTGAAC CCCGGATTGT GTTAGATGCT
TTAGAAAACT CACAGCTTAC CTGGGAAAAA CAATATGAAG CCAATGTTGG TCTTGATGTA
GGTTTGTTCC AAAGCCGTTT AAACTTTAGT GTTGATTATT ATAACCGTAA AGGTTTTGAT
CTGATTGGCG ATGTGATCAC TTCCGGAATT GGTGGTGAGG CAACCAAAAC AGCCAACTTT
GCGGATATGA AATCTCATGG TATAGAATTT ACATTGGGCG GATCGCCTGT TAAGACTACG
GATTTCAGCT GGTCGTCAAA TTTAACTTTT GGATATAATA AAAATAAGAT CACCAGCTTA
AAAAGTAAGC CAAGGATTTA CGATTTAATT ATCTCAGAAG GTGGAGCACT GGAAGGAGGA
CCGGTAAGAG GCTTGTACTC TATTGATTTT AAAGGCTTAA ATGGTCTGGG TGTACCTACA
TTTATTAATG AAAATGGTAC GTTGAGCACA AATGTATATG TTCAAAGTAC CACTCCTCTA
TATTTAAAAT ATGAAGGACC TGTAGACCCG TTGTACACGG GTGGTTGGAC CAATACTTTC
AGGTATAGAG ATTTTACCTT CAACTTTTTT GTTTCCTATC AGGCAGGTAA TAAAATAAGG
TTAAACAATG TATTCTCTGC CCGATATGAT GATAGTGATG CCTTGCCAAG GGAGTTTTTA
GACCGATGGA CCTTGCCACT GGATGAGAAT GTGACCAATG TTCCTTCCAT TGCGGATTAT
CTGGTTAGAA AAGATATCAA CGGAACCTAT CCTTATACTG CTTATAATTA CTCTACTGAC
CGTGTTGCAG ATGGTTCTTT TGTCCGCCTT AAACAGGTGT CTATGATGTA TAGCTTACCA
AAAAAATACA GTGATGCCAT TGGTGTAGGG TCTATGTCGT TAAAACTGCA GGGAAATAAT
ATCTGGTTGC TGTATGCCGA TAAAAAGCTA AAAGGCCAGG ATCCTGAGTT TTTTGGATCC
GGTGGTGTGG CACTGCCTAT ACCGAAGCAA TTGACTTTAT CATTAAAAGT TGGTTTCTAA
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| Protein sequence | MNDYSHSITG FIAHFFSGFD RKRTVIGIKK LILMMKLTAI VILALTFQAT ASSFAQKVSI
SKRGASLKEL FKEIRRQTGY DFIYNNEVIE RAGTVSVQVK EKDVSEVLIN VFSLKRLSFA
IEDKNIIVKV RDAAPERIIN GKIVAEEDGL PLPGVSIKVK GSTKSTSTNS NGEFSISVNE
GDVLLVSMIG YVMQEISTNG KNNVNVRLRQ DTKALSEVVV TGFQNINKKL FTGSATTITG
TDVKQDGVID ISRMLEGKVA GVSVQNVSGT FGTAPKIRVR GATSISGENK PLWVIDGVVL
EDVVNISNDQ LSSGDATTLL GSSVAGINAD DIESFNILKD ASATALYGAR AMNGVVVITT
KKGRSGNTQV SYSGNFSSFL KPSYNSFNIM NSADQMSLYA EIYRKGGFSP NIVNDMNGGV
FAKMYQKINA YDASLGKFGV ENTPEGRSAY LKRYALANTD WFDVLFKNSF VQEHSVSISS
GSEKSQHYFS VGYYDDKGWT LADQAKRYTM NLRGNYTLSP KLSVGILGTG ALRKQRAPGT
LGRTSNVVEG KYTRDFDINP FSYALNTSRT LTPYDEQGNL EYFTRNYAPF NIIQELDNNY
IDLDMMDMKL QGELNYKFIK NFEFKSVAAL RYVKTTREHK ITEYSNMANA YRFMPNSTIA
NNNIFLYDDP DQPQLIDKES VLPQGGFYNR NDDNLMSYDI RNQVDWKQKF GKHDVGAFIG
QQTKFADRQN SFSNGYGYQY DKGGVPFTDY RIIKMLLEGN YNYYGMNRFY DRYAAFFLNA
NYAYDSKYIF NGTVRYDGSN RMGESATARW LPTWTLSAAW NVDQEDFIKQ IEQVSYLKLR
GGYGLTASLG DATNSSVVLK NSTTLRPRLS EVEPRIVLDA LENSQLTWEK QYEANVGLDV
GLFQSRLNFS VDYYNRKGFD LIGDVITSGI GGEATKTANF ADMKSHGIEF TLGGSPVKTT
DFSWSSNLTF GYNKNKITSL KSKPRIYDLI ISEGGALEGG PVRGLYSIDF KGLNGLGVPT
FINENGTLST NVYVQSTTPL YLKYEGPVDP LYTGGWTNTF RYRDFTFNFF VSYQAGNKIR
LNNVFSARYD DSDALPREFL DRWTLPLDEN VTNVPSIADY LVRKDINGTY PYTAYNYSTD
RVADGSFVRL KQVSMMYSLP KKYSDAIGVG SMSLKLQGNN IWLLYADKKL KGQDPEFFGS
GGVALPIPKQ LTLSLKVGF
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