Gene Phep_0299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0299 
Symbol 
ID8251384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp350084 
End bp350791 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content43% 
IMG OID644933948 
Productcytochrome c oxidase subunit III 
Protein accessionYP_003090586 
Protein GI255530214 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000405282 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTTCAT TATCACAATT AGATCAGGTA AAAACCACTC CATGGAGCGG AGGCCGCTCG 
CCGTGGTCTG TAGAGTACGG CAAAATAATG ATGTGGTTTT TTCTGGTTTC TGATGCATTC
ACATTTTCGT CATTACTGAT CTATTACGGA GCGCAGCGCT TTAGTAAGTT TACCTGGCCA
GATCCGGATC TGGTTTTTCA ATCCATTCCG GGTATAACCG ACAGTGGTGC ACCACTTGTA
TTCGTGGGTC TGATGACTTT CATCCTGATC ATGAGCTCTG TAACAATGGT ACTGGCAGTT
GAGGCCGGGC ACAGACGTTC TAAAAAAGAA GTGATCTGGT GGATGGTGGC AACCATTATA
GGTGGTTTAA TGTTCCTTGG CTGTCAGGCT GCTGAATGGA CGCATTTATT CCACGAAGGT
TTTGGATGGG GTAAAATTCC TCCTATGGAG ACTTTGCACC ACCTGTTTAC CGGTGAAGTA
TCTACGGTAT CTGCACTGCA GTTCTCAAAC CTGTTTTTCA CAATAACCGG ATTTCACGGA
TTTCACGTAT TTAGTGGGGT GATCATTAAC ATCATCATTT TATGTATGAC CATTAATGGT
TCATTTGAAA AACGCGGTCA CTACCTGATG GTTGAAAAAG TTGGTTTATA CTGGCACTTT
GTAGACCTTG TTTGGGTATT TGTGTTCACC TTCTTCTATT TAGTTTAA
 
Protein sequence
MSSLSQLDQV KTTPWSGGRS PWSVEYGKIM MWFFLVSDAF TFSSLLIYYG AQRFSKFTWP 
DPDLVFQSIP GITDSGAPLV FVGLMTFILI MSSVTMVLAV EAGHRRSKKE VIWWMVATII
GGLMFLGCQA AEWTHLFHEG FGWGKIPPME TLHHLFTGEV STVSALQFSN LFFTITGFHG
FHVFSGVIIN IIILCMTING SFEKRGHYLM VEKVGLYWHF VDLVWVFVFT FFYLV