Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0299 |
Symbol | |
ID | 8251384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 350084 |
End bp | 350791 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644933948 |
Product | cytochrome c oxidase subunit III |
Protein accession | YP_003090586 |
Protein GI | 255530214 |
COG category | [C] Energy production and conversion |
COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000405282 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTTCAT TATCACAATT AGATCAGGTA AAAACCACTC CATGGAGCGG AGGCCGCTCG CCGTGGTCTG TAGAGTACGG CAAAATAATG ATGTGGTTTT TTCTGGTTTC TGATGCATTC ACATTTTCGT CATTACTGAT CTATTACGGA GCGCAGCGCT TTAGTAAGTT TACCTGGCCA GATCCGGATC TGGTTTTTCA ATCCATTCCG GGTATAACCG ACAGTGGTGC ACCACTTGTA TTCGTGGGTC TGATGACTTT CATCCTGATC ATGAGCTCTG TAACAATGGT ACTGGCAGTT GAGGCCGGGC ACAGACGTTC TAAAAAAGAA GTGATCTGGT GGATGGTGGC AACCATTATA GGTGGTTTAA TGTTCCTTGG CTGTCAGGCT GCTGAATGGA CGCATTTATT CCACGAAGGT TTTGGATGGG GTAAAATTCC TCCTATGGAG ACTTTGCACC ACCTGTTTAC CGGTGAAGTA TCTACGGTAT CTGCACTGCA GTTCTCAAAC CTGTTTTTCA CAATAACCGG ATTTCACGGA TTTCACGTAT TTAGTGGGGT GATCATTAAC ATCATCATTT TATGTATGAC CATTAATGGT TCATTTGAAA AACGCGGTCA CTACCTGATG GTTGAAAAAG TTGGTTTATA CTGGCACTTT GTAGACCTTG TTTGGGTATT TGTGTTCACC TTCTTCTATT TAGTTTAA
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Protein sequence | MSSLSQLDQV KTTPWSGGRS PWSVEYGKIM MWFFLVSDAF TFSSLLIYYG AQRFSKFTWP DPDLVFQSIP GITDSGAPLV FVGLMTFILI MSSVTMVLAV EAGHRRSKKE VIWWMVATII GGLMFLGCQA AEWTHLFHEG FGWGKIPPME TLHHLFTGEV STVSALQFSN LFFTITGFHG FHVFSGVIIN IIILCMTING SFEKRGHYLM VEKVGLYWHF VDLVWVFVFT FFYLV
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