Gene Phep_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0298 
Symbol 
ID8251383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp349463 
End bp350053 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content41% 
IMG OID644933947 
Productcytochrome c oxidase, subunit III 
Protein accessionYP_003090585 
Protein GI255530213 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000397561 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTACATA CACTGAAAGA GCAAGATTTA AAGATGGGAA CGGAATTTAA TGCAAAGCCA 
AAAAAATTCG TTCTTTGGTT ATTTGTTGTC TCGTCGACCA TTATGTTTGG TGGATGGACG
AGTTATTATA TCGTGTTCTC TGCCTCGAAG GGCAAAGGGC ATGGATTGGT ATTGCCCGAT
GTTTTTATAT ACAGTACTGC GGTATTGGTG GCCAGCAGCA TCTGTCTTTT TTTAGCCTCT
AGGGCCTTAA AAGTAGGGAA TACGGGTAGT CAGAAGTTAT TTTTATGGGC AACAATGGCT
TTAGGCTGTG TGTTTGCCTA TCTGCAGTTT GATGCCTGGA GCGTCTTGTT CCATACCGGT
GCAGCCATGG TGAACAACAA TGCGGCCATT TCTATGATCT ATATTGTGTC TGGCTTTCAC
CTGTTGCACA TTTTTGCGGG TTTATGTATT GTATTGAATG CCCTGATCGG GGCTTATAAA
GAGATGTCTT TAGAGCAGCG CAAGTACCGG ATGGAAATCG CTTCTATATT TTGGCATTTT
ATAGATATAT TATGGATATA TCTGTATGTT TTTTTACTTT TGAACAGTTA G
 
Protein sequence
MVHTLKEQDL KMGTEFNAKP KKFVLWLFVV SSTIMFGGWT SYYIVFSASK GKGHGLVLPD 
VFIYSTAVLV ASSICLFLAS RALKVGNTGS QKLFLWATMA LGCVFAYLQF DAWSVLFHTG
AAMVNNNAAI SMIYIVSGFH LLHIFAGLCI VLNALIGAYK EMSLEQRKYR MEIASIFWHF
IDILWIYLYV FLLLNS