Gene Phep_0293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0293 
Symbol 
ID8251378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp342972 
End bp344186 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content40% 
IMG OID644933942 
Producthypothetical protein 
Protein accessionYP_003090580 
Protein GI255530208 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0247634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00128473 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGAACTC ACAATTATAA TTTAACTGAG CAGTTTGAGT TTACAGGTAA AGCCAAAACT 
TTAAGCATCG TTGCTATTGT AATAGGTATA GCAGCTATAG GTTATGGTTT TTCGGCAGAG
GCGCTTCATG AGCGTACTTT TGCCAACTTG TTGCTGATGG CTTATTACTT TGCATGTGTA
TGCATGTCGG GAGCATTTTT CCTGGCTGTT CAATTTGTAG CACAGGCGGG TTGGTCTGCT
TCTATACTAC GTGTACCTCA GGCCATGGCC AGAGTTTTAC CTATAGCCGT AATCATCTTA
TTGGTGGTAA TGGGCTTAGG TTTATATACA CATAATTTGT ACCATCACTG GCATGCTGAT
GGATTAACAG ATGTCAATAG TCCGAACTAT GATAAACTGA TTGACGGTAA GTCGGCTTTC
TTAAACGTGC CTTTCTTTAT GGCGCGCCAG GTGATCTTCC TGGGGGTTTA TTCGATATTT
GCCATGTTGC TATCCAAGTT ATCTGCAAAC GAAGATCTGG AAGGCGGTTT GAATGCTTAC
AGAAAAAGCT TCAAATATTC ATGTATTTTC CTGGTAATTT ATGGATTTAC TACACCAATA
TTTGCTTTTG ATACCGTAAT GTCTTTAGAG GCACACTGGT TCTCGACCAT GTTTGGCTGG
TACAATTTTG CTGCCATGTG GGTAAGCAGT CTGGCTACCA TAGCGATCAT TATCATCCTG
TTGAGAAAAG CAGGTTATAT GAGCTGGGTA AACAACAGTC ACCTGCACAA TTTAGGACAG
TTTATATTCG GTTTCTCTAT TTTCTGGACC TATGTATGGT TTGCACAGTT CCTGTTGATT
TACTATGCCA ACATGCCTGA AGAGACTGTG TATTTTTACA AAAGGTTTGA GCACTATGAG
TTCTGGTTTT ACCTGAACCT GATCCTGAAC TTTTTAGCGC CTGTATTGCT GTTGATGGAT
AGGGACAATA AAAGACAGGA GAATATTTTA CTTACCGTAT CGATAGTTGT TTTATGCGGT
CACTGGGTTG ATTATTATCA GATGATTATG CCAGGAACAG TGGAAGAACA CCATGGGTTT
GGTATAATAG AAGTGGGTAC TGCAATAGGT TTTGTAGGTT TGTTTACTTT TACTGTTTTA
AATGCGTTGA GTAAGAAACC ATTGATTGCA AAGAACCATC CGTTTTTACA AGAGAGTTTA
AATCATCACT TGTAG
 
Protein sequence
MGTHNYNLTE QFEFTGKAKT LSIVAIVIGI AAIGYGFSAE ALHERTFANL LLMAYYFACV 
CMSGAFFLAV QFVAQAGWSA SILRVPQAMA RVLPIAVIIL LVVMGLGLYT HNLYHHWHAD
GLTDVNSPNY DKLIDGKSAF LNVPFFMARQ VIFLGVYSIF AMLLSKLSAN EDLEGGLNAY
RKSFKYSCIF LVIYGFTTPI FAFDTVMSLE AHWFSTMFGW YNFAAMWVSS LATIAIIIIL
LRKAGYMSWV NNSHLHNLGQ FIFGFSIFWT YVWFAQFLLI YYANMPEETV YFYKRFEHYE
FWFYLNLILN FLAPVLLLMD RDNKRQENIL LTVSIVVLCG HWVDYYQMIM PGTVEEHHGF
GIIEVGTAIG FVGLFTFTVL NALSKKPLIA KNHPFLQESL NHHL