Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0293 |
Symbol | |
ID | 8251378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 342972 |
End bp | 344186 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644933942 |
Product | hypothetical protein |
Protein accession | YP_003090580 |
Protein GI | 255530208 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0247634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00128473 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGGAACTC ACAATTATAA TTTAACTGAG CAGTTTGAGT TTACAGGTAA AGCCAAAACT TTAAGCATCG TTGCTATTGT AATAGGTATA GCAGCTATAG GTTATGGTTT TTCGGCAGAG GCGCTTCATG AGCGTACTTT TGCCAACTTG TTGCTGATGG CTTATTACTT TGCATGTGTA TGCATGTCGG GAGCATTTTT CCTGGCTGTT CAATTTGTAG CACAGGCGGG TTGGTCTGCT TCTATACTAC GTGTACCTCA GGCCATGGCC AGAGTTTTAC CTATAGCCGT AATCATCTTA TTGGTGGTAA TGGGCTTAGG TTTATATACA CATAATTTGT ACCATCACTG GCATGCTGAT GGATTAACAG ATGTCAATAG TCCGAACTAT GATAAACTGA TTGACGGTAA GTCGGCTTTC TTAAACGTGC CTTTCTTTAT GGCGCGCCAG GTGATCTTCC TGGGGGTTTA TTCGATATTT GCCATGTTGC TATCCAAGTT ATCTGCAAAC GAAGATCTGG AAGGCGGTTT GAATGCTTAC AGAAAAAGCT TCAAATATTC ATGTATTTTC CTGGTAATTT ATGGATTTAC TACACCAATA TTTGCTTTTG ATACCGTAAT GTCTTTAGAG GCACACTGGT TCTCGACCAT GTTTGGCTGG TACAATTTTG CTGCCATGTG GGTAAGCAGT CTGGCTACCA TAGCGATCAT TATCATCCTG TTGAGAAAAG CAGGTTATAT GAGCTGGGTA AACAACAGTC ACCTGCACAA TTTAGGACAG TTTATATTCG GTTTCTCTAT TTTCTGGACC TATGTATGGT TTGCACAGTT CCTGTTGATT TACTATGCCA ACATGCCTGA AGAGACTGTG TATTTTTACA AAAGGTTTGA GCACTATGAG TTCTGGTTTT ACCTGAACCT GATCCTGAAC TTTTTAGCGC CTGTATTGCT GTTGATGGAT AGGGACAATA AAAGACAGGA GAATATTTTA CTTACCGTAT CGATAGTTGT TTTATGCGGT CACTGGGTTG ATTATTATCA GATGATTATG CCAGGAACAG TGGAAGAACA CCATGGGTTT GGTATAATAG AAGTGGGTAC TGCAATAGGT TTTGTAGGTT TGTTTACTTT TACTGTTTTA AATGCGTTGA GTAAGAAACC ATTGATTGCA AAGAACCATC CGTTTTTACA AGAGAGTTTA AATCATCACT TGTAG
|
Protein sequence | MGTHNYNLTE QFEFTGKAKT LSIVAIVIGI AAIGYGFSAE ALHERTFANL LLMAYYFACV CMSGAFFLAV QFVAQAGWSA SILRVPQAMA RVLPIAVIIL LVVMGLGLYT HNLYHHWHAD GLTDVNSPNY DKLIDGKSAF LNVPFFMARQ VIFLGVYSIF AMLLSKLSAN EDLEGGLNAY RKSFKYSCIF LVIYGFTTPI FAFDTVMSLE AHWFSTMFGW YNFAAMWVSS LATIAIIIIL LRKAGYMSWV NNSHLHNLGQ FIFGFSIFWT YVWFAQFLLI YYANMPEETV YFYKRFEHYE FWFYLNLILN FLAPVLLLMD RDNKRQENIL LTVSIVVLCG HWVDYYQMIM PGTVEEHHGF GIIEVGTAIG FVGLFTFTVL NALSKKPLIA KNHPFLQESL NHHL
|
| |