| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0271 |
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| Symbol | |
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| ID | 8251356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 316580 |
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| End bp | 319888 |
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| Gene Length | 3309 bp |
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| Protein Length | 1102 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644933920 |
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| Product | preprotein translocase, SecA subunit |
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| Protein accession | YP_003090558 |
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| Protein GI | 255530186 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.838205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGGAT TTTTAACCAA GGTATTTGGA AGCAAATCAG AAAGAGATAT CAAGGCTTTA
CAGCCTATAG TTGTCAAGAT AAACCAGGAA TACGAGAAAC TGTCGGCATT GAGCAATGAC
GAACTGCGTA ATAAAACAGT ATATTTTAAA GATGTTATTG CCAAAGCTTT AGCAGAAATT
GATGGCAAGA TCGGTGGCCT GAAGGCAGAT GCCGAGAGCC AGGATTTATC TTTGCCGGAA
AAAACGGCTT TATATGATCA GATTGATGCT TTGATCAAAG ACCGTGACAA GGAACTGGAA
GTGGTTTTAC AGGAGATCTT ACCGCAGGCA TTTGCTGTGG TGAAGGAAAC TTCGAGACGT
TTTTCTGAAA ATGATACGCT GGAGGTTACG GCTACACAGT TTGACCGTAA TTACGCGGCA
CGTAAGAAAA ATGTAGAGAT CAAAGGCGAT AAGGCCTATT GGGCCAACCG CTGGGAAGCT
GCCGGTGTGG AAGTATTGTG GAACATGGTG CATTACGATG TACAGCTGAT AGGTGGTATG
GTTTTGCACA GCGGTAAAAT TGCCGAGATG GCAACTGGTG AGGGTAAAAC TTTGGTAAGT
ACTTTACCTG CTTACCTGAA TGCTTTGGCC GGACAAGGGG TGCACATTGT AACGGTGAAC
GATTACCTTG CCCGTCGTGA CTCGGAGTGG AATGGTCCGC TGTTTGAGTT CCATGGCATT
TCTGTAGATT GCATTGATAA GCATGAACCC AATTCGCAGG AGCGCAGGGA CGCCTATCTG
GCCGATATTA CTTATGGCAC GAATAACGAG TTTGGTTTCG ATTATCTGCG TGATAACATG
TCGCAAACCC CTGACCAGCT GGTACAGCGC AAGCTGCATT TTGCAATGGT GGATGAGGTC
GATTCCGTTT TAATTGATGA TGCCCGTACG CCTTTGATCA TTTCGGGGCC TGTTCCTTTT
GGTGACCAGC ATGAGTTTCA TGAGCTGAAA CCAAGAATAG AACGTTTGGT TGCTGCACAG
AAGGAATATG TGACGCGTGC CCTGAATGAG GCGAAGAAAC TGATCAATGA AGGTAAAGCC
GGAACCGAAG AAGGTGAAGG TGGTTTGGCC TTATTGCGTG CACATCGTGG CTTACCTAAA
AATAAAGCAT TGATCAAGTT TTTAAGTGAG GGCAGCGTGA AGCAGACCTT ATTGAAAACG
GAAAACCATT ATATGGCCGA TCAGTCTAAA AACATGCCTA AGGTTGATGC CGAGCTGTTT
TTCTATATTG ATGAGAAAAA CAACCAGGTG GAGCTGACCG AGAAAGGTAT TGAGCTGATT
ACCAAATCGG GTGAAGACCC GCATTTCTTT GTTTTACCTG ATGTGGGTAC AGAGATTGCA
GATATTGAAA AATCGGCTTT GAGCAGTGAA GAAAAAATTG CACAGAAAGA TGCTTTGATG
CGCGATTATT CGATTAAAGC AGAGCGCATC CACTCTGTGA ACCAGTTGCT GAAAGCCTAT
ACCTTATTTG AGATTGATGT GGAATACATC ATTGATGAAG GAAAGATCAA GATTGTAGAT
GAGCAGACCG GCCGTATTAT GGATGGCCGC CGTTATTCGG ATGGCTTGCA CCAGGCGATT
GAGGCGAAAG AGAATGTGAA GGTAGAAGAT GCTTCACAGA CTTATGCTAC GGTTACTTTG
CAGAACTTTT TCAGGATGTA CCACAAGCTT TGTGGTATGA CGGGTACTGC CACTACTGAA
GCGGGGGAGT TCTGGTCGAT CTATAAACTG GATGTGGTAG AGATCCCTAC GAACAGGGTG
ATCTCGAGAA AAGACCATCA GGATTATGTA TACCGTACCA TCCGTGAAAA ATACAATGCA
GTAGCAGAAG AAATTGTTTC GCTTACCCAG GCGGGCAGAC CGGTACTGGT AGGTACTACT
TCGGTAGAGA TTTCGGAATT ACTGAGCCGG ATGCTGAAGC TGCGCGGCAT TAAGCACAAT
GTACTGAATG CGAAGATGCA CCAGAAAGAA GCCGATATTG TGGCCGAAGC CGGACAGGCG
GGCCAGGTAA CGATTGCCAC CAACATGGCT GGTCGTGGTA CGGATATTAA ATTAGGCCCG
GGTGTTAAAG AAGCCGGTGG TTTGGCCATC GTGGGTACAG AAAGGCATGA GTCGCGACGT
GTAGACAGAC AGTTACGTGG CCGTGCCGGT CGCCAGGGAG ATCCGGGTTC GTCACAGTTC
TTCGTATCGC TTGAGGATAA CCTGATGCGT TTATTCGGAT CGGAAAGGAT TTCTAACATC
ATGGTGAAAA TGGGCATTGA GGATGGAGAA GTGATCCAGC ATTCGATGAT TACCAAATCT
ATTGAGCGGG CACAGAAAAA AGTGGAAGAG AATAACTTTG GTATCCGTAA GCGTTTGCTG
GAATATGACG ATGTGATGAA CTCACAGCGT TCGGTGATTT ATGCGAAACG GAGAAATGCC
TTGTTTGGCG ACCGTTTGGA TGTAGACATG AGCAATATGA CTTTTGATGT TGCCGAGGAT
ATTGTGACCG AATACAAAGA AGAAGGCAAT TATGAAGGCT TTAAGCTGGA GGTGATCAAA
AACTTTTCGG CCGATACAGC TATAGATGAG GCGGAGTTTA CTTCGAAAGG CATCCATCAT
TTAACCGATA AGCTGTTTGA AGAAGTGACT GCATTTTATG CCAGGAAATC GGATGCCATC
ATTGCCCAGG CGATGCCGGT ACTGAACCAG GTTTATGCAG AGCGTGGTGA GCAGATTGAA
CAGATTGTTG TACCATTTAC GGATGGTTTG CGCAGCATAC AGGTTCCTGT TGGCTTGAAA
AAGGCAATAG ATAACGGTGG GCGTGAGATC AATAAATCAT TTGAGAAAAC GATAGTGCTG
GCGCTGATCG ACGAATCGTG GAAAGAGCAC CTTCGTGAGA TGGATGAATT GAAGCAATCG
GTACAGAATG CGGTTTACGA GCAGAAAGAT CCCCTGATCA TTTACAAGAT GGAAGCCTTT
AACCTGTTCA AAAACATGCT GAATGCAGTG AACAAAGAGG TGGTAAGCTT CTTGTATAAA
GGGGGCATCC CGGTGCAGAC AGATCCTAAT GATGTGCGGG AAGCGCAGGC ACCAAGATCT
GCACCAAGCA GGTTAAAAAT GTCTAAACCA GAATTCGGAC AGCAAGGCAG CAGTGCAGAT
GTGATGGAAG ATACACGTGA GCTTGCTCCG CAGCAGCCTA TCCGTAAGGA AGTTACTGTG
GGCAGGAACG AGCCTTGTCC GTGTGGCAGT GGCAAGAAAT TCAAAAACTG TCACGGTGCA
GGATTGTAA
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| Protein sequence | MLGFLTKVFG SKSERDIKAL QPIVVKINQE YEKLSALSND ELRNKTVYFK DVIAKALAEI
DGKIGGLKAD AESQDLSLPE KTALYDQIDA LIKDRDKELE VVLQEILPQA FAVVKETSRR
FSENDTLEVT ATQFDRNYAA RKKNVEIKGD KAYWANRWEA AGVEVLWNMV HYDVQLIGGM
VLHSGKIAEM ATGEGKTLVS TLPAYLNALA GQGVHIVTVN DYLARRDSEW NGPLFEFHGI
SVDCIDKHEP NSQERRDAYL ADITYGTNNE FGFDYLRDNM SQTPDQLVQR KLHFAMVDEV
DSVLIDDART PLIISGPVPF GDQHEFHELK PRIERLVAAQ KEYVTRALNE AKKLINEGKA
GTEEGEGGLA LLRAHRGLPK NKALIKFLSE GSVKQTLLKT ENHYMADQSK NMPKVDAELF
FYIDEKNNQV ELTEKGIELI TKSGEDPHFF VLPDVGTEIA DIEKSALSSE EKIAQKDALM
RDYSIKAERI HSVNQLLKAY TLFEIDVEYI IDEGKIKIVD EQTGRIMDGR RYSDGLHQAI
EAKENVKVED ASQTYATVTL QNFFRMYHKL CGMTGTATTE AGEFWSIYKL DVVEIPTNRV
ISRKDHQDYV YRTIREKYNA VAEEIVSLTQ AGRPVLVGTT SVEISELLSR MLKLRGIKHN
VLNAKMHQKE ADIVAEAGQA GQVTIATNMA GRGTDIKLGP GVKEAGGLAI VGTERHESRR
VDRQLRGRAG RQGDPGSSQF FVSLEDNLMR LFGSERISNI MVKMGIEDGE VIQHSMITKS
IERAQKKVEE NNFGIRKRLL EYDDVMNSQR SVIYAKRRNA LFGDRLDVDM SNMTFDVAED
IVTEYKEEGN YEGFKLEVIK NFSADTAIDE AEFTSKGIHH LTDKLFEEVT AFYARKSDAI
IAQAMPVLNQ VYAERGEQIE QIVVPFTDGL RSIQVPVGLK KAIDNGGREI NKSFEKTIVL
ALIDESWKEH LREMDELKQS VQNAVYEQKD PLIIYKMEAF NLFKNMLNAV NKEVVSFLYK
GGIPVQTDPN DVREAQAPRS APSRLKMSKP EFGQQGSSAD VMEDTRELAP QQPIRKEVTV
GRNEPCPCGS GKKFKNCHGA GL
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