| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0255 |
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| Symbol | |
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| ID | 8251340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 297418 |
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| End bp | 299976 |
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| Gene Length | 2559 bp |
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| Protein Length | 852 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644933905 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003090543 |
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| Protein GI | 255530171 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.786505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTATC GGATAATTAG ACAGCAATCT TTTTTACCTG TTCTTTTTTT ATTTGTATTA
TCCGGACAAA GCCTGTTTGC ACAACAAAAG AACCTGCTTG CAAGTAAGGT GACGATAAGT
TTACCAGCAG ATTCGCTGAT TAAAAACCTG CTGAGGCTGG AGCTCAAAAC CAGGAACAAC
TTTGCCTTCG ACCCGGATCA GCTGCGATCC ATAAAAATAC CTGAACAGTT TTTTGTACAA
ACAGCCTTAA GCACTGTCCT TGAAAAAATA TTATCAGGTA CCAACCTGGT TTTTAGCCAG
ATTGGGAACG ATATTGTAAT TGCCCCAAAA AAAGGGGTAA TATGGACGAT TCACGGACAT
GTACGCGATA AATCAAGCGG GGAAGAACTG ATGGGGGCAA CCCTGCAGAT CCAGGCCCTG
GAGGTCGGGG TAAACACCAA TCAATATGGG TTCTATTCTA TTTCGGTTCC CGAAGGTGAT
TACCTGATAA AGGTTTCCAA TCCCGGGTAC CTGGATTTTG AAAAACGGGT TAAATTAAAT
GGAAACCGGC AGGAAGAGAT AGAATTGCTG CTTAAAGAAC GTCAGCTGGA AGAAGTGGTC
ATCCGGCAAT CCATCATTAC CCCCAATCCG ATATTGCGGA ATGAACTGAA CTTTGCCGCA
AAACAACTGA ACAATACACC TTATTATGCC GGTGAGACTG ACGTAATGAA ACGGCTGCAA
ATGGAAAATG GTATCAAAGC GCTAACGGAA GGCAGCTCGG GCTTGTTTGT TAGGGGTGGC
AATGCCGACC AGAACCTGAT CCTGCTGGAT GAAGCCATTG TGTATAATCC TTCCCATTTG
TATGGACTGG TTTCTGTTTT TAATGCCGAT GCAGTTAATA ATTTACAGGT TTACAGAGAT
TATATGCCAG CCAACTATGG GGGACGGCTT TCATCAGTAA TTGTAAACAG GATGGCCGAA
GGGAACAGTA AAGAATTTCA TTTAAATGGG GGCATTAACC TGATGTCGGC CAGGTTGGCT
GTTGAAGGAC CAATTGTAAA GGACAAAGGC TCATTCATTG TAGCCTACCG CCGCAGCTTG
CTGGATGTTT TTCACAGTAA GTTTAAACTG TTTAACCCAA ACTCTGTTTA TTACGACATC
AATGCCAAGG CAAACTATAA GCTAAACAGA GACAACAGCG TATTTTATTC CGTATACCTG
GGTAAGGACC ACCTGCTTTC AGAGAATTCA TATACAAACA ACTGGGGAAA TTTAACTTCT
ACACTGCGCT GGAACCATGT TTTTAGTTCA AGAGTGTTTT TAAATGTTTC TGCCATTTAC
AGCAATTACA GCAATCTCCT GGATTTGAAC GCCGATACCC TGTCGCAGAA AAGCCAGTGG
AGTACCGGTG TAAAAGACCT TACCCTGAAA GCCGATTATA CCTATTACAG AACGCCCTCA
AATCAGATCA AGTTTGGACT CTCGGGTATT TATCATCAGT TCTCGCCCGG CGAAATGTTC
AATCAGGAAG CTTTTGAGTT TAATATATCC CGGGACAAAT CGTTTGAATC CGCACTTTAT
TATTCCCAGC AGATTTCTCT GAGCAAGTTG TTCGAGCTGA ATTATGGCCT CCGCCTTGGC
TTTTTCAGGA ATTCGGAAGA AAAGCGGAAT ATTTTTGATG CGGAGGGAAA CAGGCTGAAG
AAGTATGACC ATAAATTTTT TGTTAAGCCA GAGCCAAGGG TCAACATCAG TTATCTCCCC
ACAGCAAACC AGCGTTTTTT TGTAACTTAC AACCTCAATT ATCAATACCT GCAACTGATC
CAGAACAGTA CACTGGCCTT TTCTTCACTT GAACCATGGG TGCCGGCATC GGCAAATATC
AAGCCGCAAC GCTCCAATCA TTTTGCACTG GGCTATCGCT ACTCTCCGGC CAATTATCTC
TTTTCCATCA GTGTTTACTA TAAGAAACTG GACAATCAGC TGGACCTGAT AGGTCATGCG
CAGATCATCA GGAATCCTGA AGTGAGAGAT CAGCTCAGGG CAGGTACATC CAACGCTTAT
GGAGTAGAAG TGGAGATGAA TAAAACTGCA GGTAAATTTT CAGGGACTTT AGCTTACAGC
TATTCCAGGG TATACCGGAA AATCTCCGAT ATTAATTTCG GAGAACGGTT TGTAGCCAAT
TATGATATCC CCCATGAACT AAAACTAACG GCCAGGTACG AGTTTAACAA CAGCCTCTCC
GTCCAGTCGT TCTTTACCTA TTCTACCGGC AGACCGCTTA CCTTGCCCGT GGGCTATTAT
CAGCATGATG GCTTAAATGT GCCGATTTTT GAAGGAAGAA ATACTTCCCG TTTCCCCGAT
TTTAGCCGCC TGGATGTTTC GGCCCAGTAC CGCTTACAAA GCCACTTATC GGGGCGCCGC
TCCCTGCAGC ATACCATTTC AATAGGTGCA TATAATTTAT ATAACCGAAA AAATCCCTTA
TATTACCATT TAAACTCCTC TTCGTTTGAG TCGAAGGGAA GTACAATTGA ATATGGGTTC
GGTTTTTATC CCTGGGTTGC CTATAGCTTT AAAATTTAA
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| Protein sequence | MFYRIIRQQS FLPVLFLFVL SGQSLFAQQK NLLASKVTIS LPADSLIKNL LRLELKTRNN
FAFDPDQLRS IKIPEQFFVQ TALSTVLEKI LSGTNLVFSQ IGNDIVIAPK KGVIWTIHGH
VRDKSSGEEL MGATLQIQAL EVGVNTNQYG FYSISVPEGD YLIKVSNPGY LDFEKRVKLN
GNRQEEIELL LKERQLEEVV IRQSIITPNP ILRNELNFAA KQLNNTPYYA GETDVMKRLQ
MENGIKALTE GSSGLFVRGG NADQNLILLD EAIVYNPSHL YGLVSVFNAD AVNNLQVYRD
YMPANYGGRL SSVIVNRMAE GNSKEFHLNG GINLMSARLA VEGPIVKDKG SFIVAYRRSL
LDVFHSKFKL FNPNSVYYDI NAKANYKLNR DNSVFYSVYL GKDHLLSENS YTNNWGNLTS
TLRWNHVFSS RVFLNVSAIY SNYSNLLDLN ADTLSQKSQW STGVKDLTLK ADYTYYRTPS
NQIKFGLSGI YHQFSPGEMF NQEAFEFNIS RDKSFESALY YSQQISLSKL FELNYGLRLG
FFRNSEEKRN IFDAEGNRLK KYDHKFFVKP EPRVNISYLP TANQRFFVTY NLNYQYLQLI
QNSTLAFSSL EPWVPASANI KPQRSNHFAL GYRYSPANYL FSISVYYKKL DNQLDLIGHA
QIIRNPEVRD QLRAGTSNAY GVEVEMNKTA GKFSGTLAYS YSRVYRKISD INFGERFVAN
YDIPHELKLT ARYEFNNSLS VQSFFTYSTG RPLTLPVGYY QHDGLNVPIF EGRNTSRFPD
FSRLDVSAQY RLQSHLSGRR SLQHTISIGA YNLYNRKNPL YYHLNSSSFE SKGSTIEYGF
GFYPWVAYSF KI
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