Gene Phep_0226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0226 
Symbol 
ID8251311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp264738 
End bp267431 
Gene Length2694 bp 
Protein Length897 aa 
Translation table11 
GC content45% 
IMG OID644933876 
Producthypothetical protein 
Protein accessionYP_003090514 
Protein GI255530142 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCA AATTCATCCT GCCAGGGATA TTCATCCTTG GAACCTGCCT TTCTTTTGCC 
TATAAACTGG CCGAGGACCC TTTTAACGAC CTACTTAAAA GATTACAGGA TTACAACAAA
CAGTATGCAC AGGAAAAGGT ACATCTGCAT TTGGATAAAC CTTATTATGC CATTGGCGAT
GACATCTGGT TTAAGGCTTA TGTCATCAAT ACCCAAACCT CGGCCCCTTC CAATATCAGC
AAGGCCCTGT ATGTTGAACT GATCAACGAA AAGGATTCCA TAAAGAGCCA GCTAAAACTG
CCTATGGACG GCGGAATCAC CTGGGGGGAT TTTAAACTGC CGGACACCCT TACCGAAGGC
AATTACAGGA TAAGGGCCTA TACCCAGTGG ATGAGAAATG CAGGCCCGGA GTTCTTCTTT
GACAAAACCA TAAAAATAGG AAACTCCTGG GCAAACAGGG TTTTTACCAA TACCCAGTAT
ACTTACAGTA AAGAGAACAC CGCAGAAAAA GTAAGTGCCA GCATCAAATT TACAGACAAG
AAAGGGCTCC CTTATGCCAA CAGTGATGTA AGCTATGAAA TTCAGCTCAA CTTCAGGAAC
CTGGCCAAAG GGAAAGCCAC TACAGACAAC CAGGGCGAAA TAAGCATCAG CTATTTAAAC
ACGCAGCCGG CATTGTACAA ATCGGGCAAG ATCCTGGCAA CCATCACCCT GCCAGGCAAA
CAGAAAATAA CAAAAAGTAT CCCTATAAAA GCCACTTCAA ATGCTGTAGA CGTACAGTTT
TTCCCTGAAG GAGGCAACCT GATCGAATCT TTGCCCAATA AGGTGGCCCT AAAAGCTGTA
AATGCTGCCG GCCTTGGAGA AGAGGTTAGC GGGGCTATTG TTGATAATGA CGGTACTGAA
GTAAACCATT TTGAAAGCCT GCACCTCGGC ATGGGCAGCT TTGTGGTCAA TCCGCAGCCT
GGCAAAACAT ACACGGCCAA AGTAAAGTTC AAAGACGGTT CAGAACAAAT TTTTAACCTG
CCTAAAGCCC TGCCCAGCGG ATATGTGTTG ACTGTAAACA ACAGCAACCC CGAAAAAATT
GCTGTAAAAA TATTGATGAC AGCTGATCTG GTAGGTACAA ATGAGTTAAA ACTGGTGGCC
CAGAATAGTG GCAATGTATA TTTTGTGACC AGGACCCCTA CACAAAAACA GATCATTACG
GCCAGCATCC CTAAAAAAGA ACTCCCTTCC GGCATCGTGC AGTTTACCCT GTTTAATGGG
GCCAATAACC CGGTATGCGA AAGACTTGCG TTTGTAAACA ACATAGAAGA CCGGATCAAT
GCTACCCTTC AAAATTTAAA ACCAACTTAT GCCAAAAGGG AAAAAGTAGA GCTGAACCTG
CTGGGTAAAT TTAGCGACAA ACCCTTGCAG GGAAGTTTTT CTGTTGCCGT TACCAATACA
GCCTCGGTAA AACCTGACCC TGAAAATGAG ACCAACATCC TGAGCAGTTT ACTCCTTACT
TCCGACCTGA TCGGGTACAT TGAAGATCCC AATTATTATT TCCTCAATAG TGACGAAAAA
ACCGCACAGG CCCTGGACAA CCTGATGCTT ACACAAGGCT GGCGAAGGAT CCTGTGGAAA
AATATCATCG CCAACACCCC ACCCATCATC CGTTATCAGC CCGAAAAATC ACTGGCCATC
AGTGGGGTCA TTACCAGCTA TGGGGGTAAG CCCATTCCAA ACAGTAAGGT ATCACTGTTC
TCTTCTTCCG GAGGTTTTTT TGCCATCGAT ACTTTAACAG ATGCCCAGGG TAGGTTTAAT
TTTGACAAGC TGATCTTTAC CGACAGCACC AAGTTTATTG TACAGGCCCG GACTGCTAAA
AACAAAAAGG ATGTGGACAT CAAGCTGGAT ATTCTTCCCG GACAGATCGT TACCAAAAAC
AAAAATACCG GCGATATTGA AGTAAATGTA AATGAGGCCC TGCAAGGCTA CCTTCAAAAA
AGTAACAGTT ACTTTGATGA GCTTACCAAA CGTGGGGTAC TGGAACGAAG CATTATGCTC
AATGAGGTCA ATATTGTGGA AAAGAAGAAC CCCGCACCAA ATTCATCCAA CCTGAACGGT
TCGGGCAGGG CAGATTTTGT GTTCACTGCC AAAATGCTGG AGAACTGCGC CACACTTTCC
CAGTGCCTGC AGGGACGTGT AGCCGGACTG ATCTTTGAAA TGGGCGTTCC TTACCTCACC
AGAAGTGGGG GAAGGGCCCC GATGCAGATT ATATTAGATG GCATGAATGT GGAGGCCGAT
TTCCTGGACA ACATTGTGCC AAGTGATGTG GAAAGTGTAG AGGTTTTAAA ATCGATTGGC
AACACGGCCA TATATGGCTC CCGCGGCGGC GGTGGTGTGC TCATCATCAC TACCAAAAGA
GGGGGAGGCT TCACCGGATC TACCTTTACG CCCGGTATCA TTACCTATTC ACCCAGGGGT
TATCACCTCA TCAGGGAATT TTACTCTCCT AAATATGATG CGGCCACACC AGATAACAGG
CCCGACCTGA GGAGCACCGT ATACTGGAAC CCTCATGTGG TAACAGATGT TAACGGAAAA
GCAACATTTA ATTACTTCAA TACAGACGAA GCCGGAACAT ACCGCGTTGT GATAGAAGGA
ATAGATATGA TGGGACACCT GGCAAGGGCA GTGTATACCT ACGAAGTAAA ATAA
 
Protein sequence
MKFKFILPGI FILGTCLSFA YKLAEDPFND LLKRLQDYNK QYAQEKVHLH LDKPYYAIGD 
DIWFKAYVIN TQTSAPSNIS KALYVELINE KDSIKSQLKL PMDGGITWGD FKLPDTLTEG
NYRIRAYTQW MRNAGPEFFF DKTIKIGNSW ANRVFTNTQY TYSKENTAEK VSASIKFTDK
KGLPYANSDV SYEIQLNFRN LAKGKATTDN QGEISISYLN TQPALYKSGK ILATITLPGK
QKITKSIPIK ATSNAVDVQF FPEGGNLIES LPNKVALKAV NAAGLGEEVS GAIVDNDGTE
VNHFESLHLG MGSFVVNPQP GKTYTAKVKF KDGSEQIFNL PKALPSGYVL TVNNSNPEKI
AVKILMTADL VGTNELKLVA QNSGNVYFVT RTPTQKQIIT ASIPKKELPS GIVQFTLFNG
ANNPVCERLA FVNNIEDRIN ATLQNLKPTY AKREKVELNL LGKFSDKPLQ GSFSVAVTNT
ASVKPDPENE TNILSSLLLT SDLIGYIEDP NYYFLNSDEK TAQALDNLML TQGWRRILWK
NIIANTPPII RYQPEKSLAI SGVITSYGGK PIPNSKVSLF SSSGGFFAID TLTDAQGRFN
FDKLIFTDST KFIVQARTAK NKKDVDIKLD ILPGQIVTKN KNTGDIEVNV NEALQGYLQK
SNSYFDELTK RGVLERSIML NEVNIVEKKN PAPNSSNLNG SGRADFVFTA KMLENCATLS
QCLQGRVAGL IFEMGVPYLT RSGGRAPMQI ILDGMNVEAD FLDNIVPSDV ESVEVLKSIG
NTAIYGSRGG GGVLIITTKR GGGFTGSTFT PGIITYSPRG YHLIREFYSP KYDAATPDNR
PDLRSTVYWN PHVVTDVNGK ATFNYFNTDE AGTYRVVIEG IDMMGHLARA VYTYEVK