Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0226 |
Symbol | |
ID | 8251311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 264738 |
End bp | 267431 |
Gene Length | 2694 bp |
Protein Length | 897 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644933876 |
Product | hypothetical protein |
Protein accession | YP_003090514 |
Protein GI | 255530142 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATTCA AATTCATCCT GCCAGGGATA TTCATCCTTG GAACCTGCCT TTCTTTTGCC TATAAACTGG CCGAGGACCC TTTTAACGAC CTACTTAAAA GATTACAGGA TTACAACAAA CAGTATGCAC AGGAAAAGGT ACATCTGCAT TTGGATAAAC CTTATTATGC CATTGGCGAT GACATCTGGT TTAAGGCTTA TGTCATCAAT ACCCAAACCT CGGCCCCTTC CAATATCAGC AAGGCCCTGT ATGTTGAACT GATCAACGAA AAGGATTCCA TAAAGAGCCA GCTAAAACTG CCTATGGACG GCGGAATCAC CTGGGGGGAT TTTAAACTGC CGGACACCCT TACCGAAGGC AATTACAGGA TAAGGGCCTA TACCCAGTGG ATGAGAAATG CAGGCCCGGA GTTCTTCTTT GACAAAACCA TAAAAATAGG AAACTCCTGG GCAAACAGGG TTTTTACCAA TACCCAGTAT ACTTACAGTA AAGAGAACAC CGCAGAAAAA GTAAGTGCCA GCATCAAATT TACAGACAAG AAAGGGCTCC CTTATGCCAA CAGTGATGTA AGCTATGAAA TTCAGCTCAA CTTCAGGAAC CTGGCCAAAG GGAAAGCCAC TACAGACAAC CAGGGCGAAA TAAGCATCAG CTATTTAAAC ACGCAGCCGG CATTGTACAA ATCGGGCAAG ATCCTGGCAA CCATCACCCT GCCAGGCAAA CAGAAAATAA CAAAAAGTAT CCCTATAAAA GCCACTTCAA ATGCTGTAGA CGTACAGTTT TTCCCTGAAG GAGGCAACCT GATCGAATCT TTGCCCAATA AGGTGGCCCT AAAAGCTGTA AATGCTGCCG GCCTTGGAGA AGAGGTTAGC GGGGCTATTG TTGATAATGA CGGTACTGAA GTAAACCATT TTGAAAGCCT GCACCTCGGC ATGGGCAGCT TTGTGGTCAA TCCGCAGCCT GGCAAAACAT ACACGGCCAA AGTAAAGTTC AAAGACGGTT CAGAACAAAT TTTTAACCTG CCTAAAGCCC TGCCCAGCGG ATATGTGTTG ACTGTAAACA ACAGCAACCC CGAAAAAATT GCTGTAAAAA TATTGATGAC AGCTGATCTG GTAGGTACAA ATGAGTTAAA ACTGGTGGCC CAGAATAGTG GCAATGTATA TTTTGTGACC AGGACCCCTA CACAAAAACA GATCATTACG GCCAGCATCC CTAAAAAAGA ACTCCCTTCC GGCATCGTGC AGTTTACCCT GTTTAATGGG GCCAATAACC CGGTATGCGA AAGACTTGCG TTTGTAAACA ACATAGAAGA CCGGATCAAT GCTACCCTTC AAAATTTAAA ACCAACTTAT GCCAAAAGGG AAAAAGTAGA GCTGAACCTG CTGGGTAAAT TTAGCGACAA ACCCTTGCAG GGAAGTTTTT CTGTTGCCGT TACCAATACA GCCTCGGTAA AACCTGACCC TGAAAATGAG ACCAACATCC TGAGCAGTTT ACTCCTTACT TCCGACCTGA TCGGGTACAT TGAAGATCCC AATTATTATT TCCTCAATAG TGACGAAAAA ACCGCACAGG CCCTGGACAA CCTGATGCTT ACACAAGGCT GGCGAAGGAT CCTGTGGAAA AATATCATCG CCAACACCCC ACCCATCATC CGTTATCAGC CCGAAAAATC ACTGGCCATC AGTGGGGTCA TTACCAGCTA TGGGGGTAAG CCCATTCCAA ACAGTAAGGT ATCACTGTTC TCTTCTTCCG GAGGTTTTTT TGCCATCGAT ACTTTAACAG ATGCCCAGGG TAGGTTTAAT TTTGACAAGC TGATCTTTAC CGACAGCACC AAGTTTATTG TACAGGCCCG GACTGCTAAA AACAAAAAGG ATGTGGACAT CAAGCTGGAT ATTCTTCCCG GACAGATCGT TACCAAAAAC AAAAATACCG GCGATATTGA AGTAAATGTA AATGAGGCCC TGCAAGGCTA CCTTCAAAAA AGTAACAGTT ACTTTGATGA GCTTACCAAA CGTGGGGTAC TGGAACGAAG CATTATGCTC AATGAGGTCA ATATTGTGGA AAAGAAGAAC CCCGCACCAA ATTCATCCAA CCTGAACGGT TCGGGCAGGG CAGATTTTGT GTTCACTGCC AAAATGCTGG AGAACTGCGC CACACTTTCC CAGTGCCTGC AGGGACGTGT AGCCGGACTG ATCTTTGAAA TGGGCGTTCC TTACCTCACC AGAAGTGGGG GAAGGGCCCC GATGCAGATT ATATTAGATG GCATGAATGT GGAGGCCGAT TTCCTGGACA ACATTGTGCC AAGTGATGTG GAAAGTGTAG AGGTTTTAAA ATCGATTGGC AACACGGCCA TATATGGCTC CCGCGGCGGC GGTGGTGTGC TCATCATCAC TACCAAAAGA GGGGGAGGCT TCACCGGATC TACCTTTACG CCCGGTATCA TTACCTATTC ACCCAGGGGT TATCACCTCA TCAGGGAATT TTACTCTCCT AAATATGATG CGGCCACACC AGATAACAGG CCCGACCTGA GGAGCACCGT ATACTGGAAC CCTCATGTGG TAACAGATGT TAACGGAAAA GCAACATTTA ATTACTTCAA TACAGACGAA GCCGGAACAT ACCGCGTTGT GATAGAAGGA ATAGATATGA TGGGACACCT GGCAAGGGCA GTGTATACCT ACGAAGTAAA ATAA
|
Protein sequence | MKFKFILPGI FILGTCLSFA YKLAEDPFND LLKRLQDYNK QYAQEKVHLH LDKPYYAIGD DIWFKAYVIN TQTSAPSNIS KALYVELINE KDSIKSQLKL PMDGGITWGD FKLPDTLTEG NYRIRAYTQW MRNAGPEFFF DKTIKIGNSW ANRVFTNTQY TYSKENTAEK VSASIKFTDK KGLPYANSDV SYEIQLNFRN LAKGKATTDN QGEISISYLN TQPALYKSGK ILATITLPGK QKITKSIPIK ATSNAVDVQF FPEGGNLIES LPNKVALKAV NAAGLGEEVS GAIVDNDGTE VNHFESLHLG MGSFVVNPQP GKTYTAKVKF KDGSEQIFNL PKALPSGYVL TVNNSNPEKI AVKILMTADL VGTNELKLVA QNSGNVYFVT RTPTQKQIIT ASIPKKELPS GIVQFTLFNG ANNPVCERLA FVNNIEDRIN ATLQNLKPTY AKREKVELNL LGKFSDKPLQ GSFSVAVTNT ASVKPDPENE TNILSSLLLT SDLIGYIEDP NYYFLNSDEK TAQALDNLML TQGWRRILWK NIIANTPPII RYQPEKSLAI SGVITSYGGK PIPNSKVSLF SSSGGFFAID TLTDAQGRFN FDKLIFTDST KFIVQARTAK NKKDVDIKLD ILPGQIVTKN KNTGDIEVNV NEALQGYLQK SNSYFDELTK RGVLERSIML NEVNIVEKKN PAPNSSNLNG SGRADFVFTA KMLENCATLS QCLQGRVAGL IFEMGVPYLT RSGGRAPMQI ILDGMNVEAD FLDNIVPSDV ESVEVLKSIG NTAIYGSRGG GGVLIITTKR GGGFTGSTFT PGIITYSPRG YHLIREFYSP KYDAATPDNR PDLRSTVYWN PHVVTDVNGK ATFNYFNTDE AGTYRVVIEG IDMMGHLARA VYTYEVK
|
| |