Gene Phep_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0225 
Symbol 
ID8251310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp263968 
End bp264729 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content46% 
IMG OID644933875 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_003090513 
Protein GI255530141 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA TAAAAGTTAC GATAAAAGAC CATTTAAGCA TCATTACGTT AGACAGAGGT 
AAATCCAATG CCCTTAACCG GGAAATGATC ACCGAACTGA GCGACATGCT GCACAATATA
GCCGGAGACC CCAATATTGC AGGTGTAATC ATCACCGGAA AAGAAAATTT CTTTTCTGCA
GGCCTGGACC TGATTGAACT TTACAACTAT AATGAAGCAG AGGCCGAATC TTTCTGGCAC
TTGTTTTTGA ATTTCACTGC AGCCATTACG GCCTTTAAAA AACCTTTGGT AGCTGCCGTT
AACGGCCATA GCCCTGCCGG TGGCTGTGTA ATTGCCCTGG CTTGTGATTA CAGGATCATG
GCAGAGGGTA ACTATATCAT TGGCCTGAAT GAAGTGCCTG TAGGCATTAT TGTACCCAAC
AGCATTTTTA ACCTGTACGC GTTCTGGCTG GGCCAGGCCA ATGCGTCGCG GAGCTTACTG
GAGGGGAAAC TCTTTAGTCC GGATGAAGCT TTGCAGATTG GCCTGGTAGA TGAGCTGGTC
AATCCTGCCG GTATTTTAAC CGCGGCAGAG CGAAAGATCA GGAAGTATAT GGCCATGGAG
CGCAATACCT GGGAACAGAG TAAGCTCAAC ATCAGACAGG GGCTAATTGC ATCAACCGGT
GCCGACCAGT CGGAAGCCCT GCAAAAGATG CTGAAGCAAT GGTGGGCACC TACTACAAGA
AATATCCTGA AAACAATTAT TGATAACCTG CAAAAAAAAT AA
 
Protein sequence
MNTIKVTIKD HLSIITLDRG KSNALNREMI TELSDMLHNI AGDPNIAGVI ITGKENFFSA 
GLDLIELYNY NEAEAESFWH LFLNFTAAIT AFKKPLVAAV NGHSPAGGCV IALACDYRIM
AEGNYIIGLN EVPVGIIVPN SIFNLYAFWL GQANASRSLL EGKLFSPDEA LQIGLVDELV
NPAGILTAAE RKIRKYMAME RNTWEQSKLN IRQGLIASTG ADQSEALQKM LKQWWAPTTR
NILKTIIDNL QKK