Gene Phep_0167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0167 
Symbol 
ID8251252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp196435 
End bp197373 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content43% 
IMG OID644933817 
Productband 7 protein 
Protein accessionYP_003090455 
Protein GI255530083 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTATT CATTTTACAT TTTTCTTTTC GTCGCAGTGG TTATCCTGCT CAGTTCTTTT 
GTTACGGTTA AACAGGGAAC AATTGCAGTA ATTACAATTT TTGGCAAATA CAGGAGATTA
CTTAGTCCGG GCCTTAGTTT AAAAATTCCA TTAATAGAAG CTATCCATTC CCGCATATCT
ATACAAAACA GGTCGGTCGA ATTGTCCTTT CAGGCGGTTA CACAGGACCA GGCCAATGTA
TATTTTAAGG CCATGCTGCT CTATTCTGTT ATCAATCACG ATGAAGAGAC CATTAAAAAC
GTGGCCTTTA AATTCGTCGA TTCAACCAAT CTAATGCAGG CACTCATCCG CACCATAGAA
GGTTCGATCA GGGCTTATGT AGCTACACAA AAGCAAGCCA ATGTACTGGC GCAACGCAAT
GAGATTGTAG AACACGTGAA GCATCAGATT GATCAGGTAC TGGAAACCTG GGGCTATCAC
CTGCAAGACC TGCAACTGAA CGACATTACC TTCGACGAAG AGATCATGCG CTCTATGAGC
CGGGTGGTTG CTTCTAATAA TTTAAAAGCC GCCGCAGAGA ATGAAGGGCA GGCTTTGCTG
ATCACCAAAA CAAAAGGTGC AGAAGCAGAC GGAAACGCCA TTAAAATTGC TGCTGCCGCT
GAACGTGAAG CCGCACAGTT ACGTGGACAG GGTATTGCCT TATTCAGGGC CGAAGTTGCA
CATGGCATGA CAAAAGCTGC GCAGGAAATG GAAGAGGCAA ATCTTGATAT TTCTGTAATC
CTGTTTACCA TGTGGACAGA ATCCATTAAA CAATTTGCAG AGAACAGTGA AGGCAACGTC
ATCTTCCTTG ATGGCTCTAC AGAAGGCATG AACCGTACTA TGAAAGAAAT GATGGCTATG
CAGATGCAAA AAGAGACCCA AAACAAGTCA GGCAAATAA
 
Protein sequence
MAYSFYIFLF VAVVILLSSF VTVKQGTIAV ITIFGKYRRL LSPGLSLKIP LIEAIHSRIS 
IQNRSVELSF QAVTQDQANV YFKAMLLYSV INHDEETIKN VAFKFVDSTN LMQALIRTIE
GSIRAYVATQ KQANVLAQRN EIVEHVKHQI DQVLETWGYH LQDLQLNDIT FDEEIMRSMS
RVVASNNLKA AAENEGQALL ITKTKGAEAD GNAIKIAAAA EREAAQLRGQ GIALFRAEVA
HGMTKAAQEM EEANLDISVI LFTMWTESIK QFAENSEGNV IFLDGSTEGM NRTMKEMMAM
QMQKETQNKS GK