| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0148 |
|---|
| Symbol | |
|---|
| ID | 8251233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 175658 |
|---|
| End bp | 176800 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644933798 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003090436 |
|---|
| Protein GI | 255530064 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA GGATATTGTT TATTACCCAG GATCTTGGGA GGACCGGATC GGAAATGGTG
TTGTGGTATT TGCTGATCAA CCTGGACCGG GAGAAATATG AAGTTTCGGT TTTTTGCCTG
AGAAAGGGGG CACTATATGA CCTCCTGCCA GACTATATAG AAAAAAATAT CCTGTATAAA
TCCAGCCCGG ATTGGTCTGA CCGTGCGTTC AGGCGCTTGA TTAAGCTGTT CGGCGTACAC
CCTTTAACTT ACCAGTTAAA GAGGATCCAG CAACGCTTTA AGGCAGATGT ATGGTATGTA
AATACCATTG CGGTTCCTGA GGTACTGGAG ATCCCTAAAC CTGAAGGAGT AAAAATGATT
ACCCATATCC ATGAATATTT ATATGCTTTT AGTGAAATTA AGGCGAAGAC CCTGCAAAGG
GCAATGGATT ATTCCGATGC ATGGATCGGC TGTTCTGATA TGGTATGTGC AAAACTGGTT
GACCTGAAGC AGCAGAATGT GTCCCTGCAA TATAGTTTTG TGGATACGGA AACCATTCAT
ACGGATCCGT TGAAAATTGC TGCCATTAAG GAAAAGCTGG GGATTTTACC TGGAGACCAG
GTCTGGGTGG TTTCCGGGGG CACGAAATAC ATGAAAGGTC TGGACCAGGT TTTACCTATC
CTGGAGCATT TTAAAGCGGA GCCGGTAAAG ATCATCTGGC TTGGGGCACA GGTAAGTAAT
GCGCTGGAGT TATATGTAAG AACCGTTGCG GAGGAAAAAT ATCCGGGCAG GCTGTTGTTT
GCCGGGGCTT TAGCTGCAGA TTATTACAAC TATATGTCTG CTGCAACTGG TTTGCTGCTG
TTGTCGAGGG AAGAGACATT TTCATTGGTG ATGATCGAGG CAGCTTATCT CGGCCTGCCC
ATCGTTGCTT TTGATATCGG TATTGCCAGT GCGTTTATAC AAAAGGACAT GGGAACTGTG
GCCAAAAACC GTAACCTGGA TGAATTGATC CTGGGCATGG AAAAAGTTCA TGAGGGGGCT
GGCTATAGTA AAGTAAGCTT AAGGAATGCA GCAATGGCCT ATAGTGCAAA GCAGCAGCTC
CCGCTTTATG AGCAGTTATT GGCTAAGGTC ATCGCGCAGC TTACTGCTGA AAACCAGGAC
TAA
|
|---|
| Protein sequence | MKKRILFITQ DLGRTGSEMV LWYLLINLDR EKYEVSVFCL RKGALYDLLP DYIEKNILYK
SSPDWSDRAF RRLIKLFGVH PLTYQLKRIQ QRFKADVWYV NTIAVPEVLE IPKPEGVKMI
THIHEYLYAF SEIKAKTLQR AMDYSDAWIG CSDMVCAKLV DLKQQNVSLQ YSFVDTETIH
TDPLKIAAIK EKLGILPGDQ VWVVSGGTKY MKGLDQVLPI LEHFKAEPVK IIWLGAQVSN
ALELYVRTVA EEKYPGRLLF AGALAADYYN YMSAATGLLL LSREETFSLV MIEAAYLGLP
IVAFDIGIAS AFIQKDMGTV AKNRNLDELI LGMEKVHEGA GYSKVSLRNA AMAYSAKQQL
PLYEQLLAKV IAQLTAENQD
|
|---|
| |