Gene Phep_0134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0134 
Symbol 
ID8251219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp160716 
End bp161555 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content47% 
IMG OID644933784 
Productpantoate/beta-alanine ligase 
Protein accessionYP_003090422 
Protein GI255530050 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAGTTA TAAATACCAT AGCGGCATTA AAGTCGCTGC TTGAACCAAT AAAGTTGGCT 
CAACAGAAAA TTGCCTTAGT GCCCACCATG GGCGCTTTGC ATAAAGGACA CGTATCGCTG
ATCAACATTG CACAGCAACA GGCTGATGTG GTGGTATGCA GTATTTTTGT AAACCCAACC
CAGTTTACCG ATCCCAAAGA CCTCGAAAAA TACCCCCGCC CCCTGGAGCA CGACATGAAA
ATGCTGGAAG ATGCCGGATG TAATGTGGTT TTTATGCCCT CGGTTACTGA AATGTACCCC
CGGCCGGAAG TATGGCACAT AGACCTTGGC CCTGCCGAAT TCCTTTTGGA AGGTGCATTC
CGTAAAGGCC ATTACCAGGG CGTAACCCAA ATCGTAAAAA AGCTTTTTGA TGCCGTAAAC
CCCGATATTG CCTTTTTTGG CCAGAAAGAT TTTCAGCAGG TGCTGATGAT CAAAAATATG
GTGGCTTATT TTAATATGCC TGTAGAGATC GTTTCCTGCC CCATCATCAG GGAAGAAGAT
GGTCTGGCCA TGAGCTCACG CAACATCCAC CTCACAGCAG CCGACCGGAA AAACGCGCTG
GTCTTGAGCA GGGCATTAGG TTATGTACAG GATAATTTTA CAGCACACAG TATTCCTGAA
CTGTTAAAAG AAGCAGGAAA AATGATCAGC AATACCCCCG GTGTAGTACT CGATTATTTT
ACCATTGCCA ACGGCGAAAC CCTGCTGCCC GAAGAAGATA AGACCCATCA CCCTATTGTG
GCGCTGGTTG CCGCCAGGGT TGGCCAAACC CGTCTTATTG ATAATATGAT ACTGAACTGA
 
Protein sequence
MKVINTIAAL KSLLEPIKLA QQKIALVPTM GALHKGHVSL INIAQQQADV VVCSIFVNPT 
QFTDPKDLEK YPRPLEHDMK MLEDAGCNVV FMPSVTEMYP RPEVWHIDLG PAEFLLEGAF
RKGHYQGVTQ IVKKLFDAVN PDIAFFGQKD FQQVLMIKNM VAYFNMPVEI VSCPIIREED
GLAMSSRNIH LTAADRKNAL VLSRALGYVQ DNFTAHSIPE LLKEAGKMIS NTPGVVLDYF
TIANGETLLP EEDKTHHPIV ALVAARVGQT RLIDNMILN