| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0108 |
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| Symbol | |
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| ID | 8251193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 130624 |
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| End bp | 131595 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644933758 |
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| Product | hypothetical protein |
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| Protein accession | YP_003090396 |
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| Protein GI | 255530024 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03519] Bacteroidetes-specific putative membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.120499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAAAC TCATATTATT AATTACAGGA TTAATATTTT TCCTCCTGCA TCCTGTCCAG
GCACAACAGG ATGCACAGTT TAGCCAGTAC ATGTTTAATG GCATATATAT AAACCCGGCT
TATGCAGGGT ACCGGGAGCA GCTGAACCTA CATGCTTTTT ACAGGAACCA GTGGACGGGG
ATAGAAGGAG CTCCGAAAAC CATGTCTTTA GCCGTAGATG CCATCGCTAA TGGGGGAAAT
GTTGGTTTGG CTTTTCAGGT GTCTGGTGAT AAATTAGGGG CACAAAGTAA CCTTTCGACC
TACGCAAGCT ATGCCTATCG CCTGAAAATG AGTGCCGATG GCACCTCCAG ATTGGCTTTT
GGGGTTAGTG CAGGTCTGAT ACAGTTAGGA ATAAACGGCG CCTTACTTAA CCCTAATGAC
CCGGAACCCG ATCAGCCCAC AGGCCTGCAA AATACGGTTG TACCCGATGC TAAAGCAGGG
GTATATTATG CCGATCAGCG TTTTTATGCA GGGTTTAGTG TAGATAACCT GGTATCGCAA
TACATTGATA TTAAAAAGTA TGCTTTTATG CCCCAGCCCA AGCCGCATTT TTATTTAACA
GCAGGAATGT TGCTGCCCTT ATCTACTGAT ATTTTGCTAA AACCTTCATT TCTGTTGAAA
GATGACCGTG GCGGTCCCAC AAGTTTGGAT GTAAATGTTT TTTTTATCCT GGCCGATAAG
TTATGGCTTG GTGGAGCCTA CCGTACAGGA GTTAAGCTAT ACCATAAACA GTACGCCCAG
CAAGGATTGT CCAACCTCAA TTCGGCTGTG GCGGCAATAC AAATTTTTCC GGGTTCCAAT
TTAAGGATTG GTTATGCTTA CGATTTTTCG ATGGGTCCGA TGCAGGGCTA CAGCAATGGT
ACGCATGAGC TGTCTATAGG CTATTTCTTT AACCGAAAAA ATACCCGCAT GCTAAGTCCA
CGGTATTTTT AA
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| Protein sequence | MKKLILLITG LIFFLLHPVQ AQQDAQFSQY MFNGIYINPA YAGYREQLNL HAFYRNQWTG
IEGAPKTMSL AVDAIANGGN VGLAFQVSGD KLGAQSNLST YASYAYRLKM SADGTSRLAF
GVSAGLIQLG INGALLNPND PEPDQPTGLQ NTVVPDAKAG VYYADQRFYA GFSVDNLVSQ
YIDIKKYAFM PQPKPHFYLT AGMLLPLSTD ILLKPSFLLK DDRGGPTSLD VNVFFILADK
LWLGGAYRTG VKLYHKQYAQ QGLSNLNSAV AAIQIFPGSN LRIGYAYDFS MGPMQGYSNG
THELSIGYFF NRKNTRMLSP RYF
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