| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0106 |
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| Symbol | |
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| ID | 8251191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 114607 |
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| End bp | 115791 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644933756 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003090394 |
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| Protein GI | 255530022 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCACCTGG TATTCATCAC AATTATTGGT TCGATTTTTA TTCTTTGCCT GGCCATTGTA
AAGCTGTTGC TTTTCAGTAA GGGAAGGCAG TATTTAAACC TTTTGCTGTG CATAGCCATT
TTTGGGGTAA TTTGGTACGG CATTATTTAT TTGCTTACCA ACTCTGGGCT GATAAAAAAT
CACCCTGTAC TCTTTAATAA AGGCTTACCA CTTTATTATC TCATTGCACC ATGCTTTTTT
CTCTACATCA GGGGGTCCCT GCAGCCAGAT TACGCTGTTT TCAGGTTAAA GTACCTGTTG
CACCTAGTCG TTGTTATTCC GGCCCTGGTT GCTATTGTCC CATATAGTTT TGCCGATACT
GCTACACAAC AATGGGTGGT AAACCAGATA GACAAGGATG TCGCTTTTGC CTTTAGTAAC
AACAGGTATA TCGTGCCCAA CTGGCATTGG TTCACTTTTC CACTATCTGC ACTTTTATAT
ACACTGGCGC AATTCAGTTT TGCAATAGGG TATGCCAAAA CAAAAAAGTA TGAAAAAAAG
ACGCTCACCT GGGTATTGGC ATTTACGGTT ATTTGCGGAA TTATTTTCTT TGGAATGCTT
GCTGTAAATT TAAGTGTGCT GTCAAATTTC AATGATATCT GGCGTATTCT GCACTCCGGA
AGGCTGGTGT TATTCCTGGG TTTAGCAATG CTGGCGCTCA GTGGTTCTTT TTTTTTAAGC
CCCAGCCTTA TCTTTGGCTT TGTCCGCTTG AAACCAGCAA GCCAGGCCCG TACTGCTGAA
GCGCGTTCAG GCCGCCTGGA AGGGGAGCTC CATGAAAACC GGGTTAAGAT GTATGATACT
TCCCTTATTG TAAGGGTCGA AAAATATATA CTGCAGGCCG AGGTATTCAG AAAAACGGGT
CTTACGGTCA GCGATCTTGC CTCTATGCTG GAAATACCCA ATCATAAACT TTCCGATCTG
TTTAACAATC ATTATAAGCT TAACTTCAAT ACCTATATCA ATAACCTGCG TGTACATTAT
GTAAAAGGGC GGCTTGATGC CGGTGAATGG AAGCAGTTTA CACTGGAAGC TATTGCACAG
GAAGCCGGGT TTTCTTCCCG CAACACTTTT CTGATCGCAT TTAAAAGGAT AATGGGGGTT
ACGCCCTCCA ATTACCTGAC AAGCCTGAAA GACAAAGCTG CTTAA
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| Protein sequence | MHLVFITIIG SIFILCLAIV KLLLFSKGRQ YLNLLLCIAI FGVIWYGIIY LLTNSGLIKN
HPVLFNKGLP LYYLIAPCFF LYIRGSLQPD YAVFRLKYLL HLVVVIPALV AIVPYSFADT
ATQQWVVNQI DKDVAFAFSN NRYIVPNWHW FTFPLSALLY TLAQFSFAIG YAKTKKYEKK
TLTWVLAFTV ICGIIFFGML AVNLSVLSNF NDIWRILHSG RLVLFLGLAM LALSGSFFLS
PSLIFGFVRL KPASQARTAE ARSGRLEGEL HENRVKMYDT SLIVRVEKYI LQAEVFRKTG
LTVSDLASML EIPNHKLSDL FNNHYKLNFN TYINNLRVHY VKGRLDAGEW KQFTLEAIAQ
EAGFSSRNTF LIAFKRIMGV TPSNYLTSLK DKAA
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