| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0099 |
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| Symbol | |
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| ID | 8251184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 108447 |
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| End bp | 109064 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644933749 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003090387 |
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| Protein GI | 255530015 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.36939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATATT TAATACATAC GCCTGTTGCC TCGATCATCT TTCTTTTTAC TATAGTCACC
AGCATTTACG CGTTTAACGA CAATGGCCTG TATGGCAAAT TTATGCTGCA TCCCTATAGC
GTTTCACGCA GGTATAAAGT GTATACTTTG ATTACCAGTG GACTCATTCA TGCCGACTGG
ATGCACCTGA TCTTTAACAT GATGACCTTC TTTTTCTTTG CCTTCCAGCT GGAGGCAATG
ATCGGTTCAT GGCAGTTTGG GGCCGTATAT TTTTTAAGCC TGATACTGAG CGATATTCCA
TCGGTAATGA AACATAAGAA TGACATGTGG TACAACAGCC TCGGTGCTTC CGGCGCCATC
AGCGGGGTAT TGTTCAGCTT TATCCTGTTT CAGCCTTTTT CCAGCATGAT GATATTTCCG
ATACCCATTC GCATCTGGGC AATTATTTTT GGGCCACTGT ACCTGGTTTA TTGTGTGTAT
GCCTCTAAAA ATGCCAGAGA CCACATTAAC CACGATGCAC ACTTTTTTGG TGCACTGGCA
GGAATGATTG TTACCGTATT GGTAGTGCCC GGAACAATCC CTCATTTCAT TGGTCAGCTG
CTGGCTAAAA TCGGGTAA
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| Protein sequence | MEYLIHTPVA SIIFLFTIVT SIYAFNDNGL YGKFMLHPYS VSRRYKVYTL ITSGLIHADW
MHLIFNMMTF FFFAFQLEAM IGSWQFGAVY FLSLILSDIP SVMKHKNDMW YNSLGASGAI
SGVLFSFILF QPFSSMMIFP IPIRIWAIIF GPLYLVYCVY ASKNARDHIN HDAHFFGALA
GMIVTVLVVP GTIPHFIGQL LAKIG
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