Gene Phep_0064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0064 
Symbol 
ID8251148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp68905 
End bp70338 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content45% 
IMG OID644933713 
Producthypothetical protein 
Protein accessionYP_003090352 
Protein GI255529980 
COG category[S] Function unknown 
COG ID[COG3014] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAATA TCCGCAGGAA CATTTTTAAA GCATCATTCT TTTTAGGACT GGTGCTTTTT 
CTTTCCGGCT GTGCCAGCTA TAACGACATG ATCGCCTCTT ATTACAAGCA GATCGCTGCT
GGTAATTATA CGGAAGCGGT AAAAGAGCTG GATAAGAACA AACTGCTGCA AAAGCCACGC
AACAAGCTTC TTTTTCTGAT GGAAAAAGGG AAGGCGAGCC ATCTTTCAGG CGATTACGAA
AATAGCAACC GTTATTTTAA TGAGGCCGAT CAGCTCTTGG AGAACGGAAT AGGCGGAGCT
ATGGATGCCG TAGTAGGCAC ACTGGTTAAC CCCATGACGC AAAGCTACAA AGGCGAGGAC
TTTGAGAAGT TTATGATCCA TTATTACAAG GCACTGAACT ATGTGTACCT GGGGCTTAAC
GAAGACGCCA TTGTAGAGGC CCGACGCATT ACACTGCAAT CGCAGGAGCA AGGCGATAAG
TTCAATGATA AAGATAGCCG CTATTCCAAA GATGCCTTTT CATTGATGCT GCAGGGGCTG
ATCTATGAAC AGGATGGTGA TATAAACAAT GCCTTTATTG CCTATAGAAA TGCAGCAGAA
GTTTACCTGA ACAGTAAAGA TCAGACTTAT TACGGGGTGA AAATACCGGC TGAACTGAAA
CAGGATGTGT TAAGAATGGC CGACAGGAAT GGATTTACTG CCGAATTGAG CCGTTTTGAA
GCACTGTTTG GTATGAAGTA CCAGGCAGAG CCCAAGCCGG AAGGTGGCGA ACTGATCTTT
TTCTGGGAAA ACGGATTGGC CCCGGTTAAA AAACAGGAAG AGCTTTTCTT TTCACTGATC
AAAGGCAGTA ATGGCGACCT CTTCTTTACC AATCTTGGTG GAACGATCAT TATCCCCTTT
AACCATACGT ACAGCAATAG TAATTTTAGC CTCAATGGGG TAGAAAGCCT TCGGGCAACG
TATCCCAAAT ATCAGGCCCA GCCACCCCAT TACAGTTCTG CAACACTGAG TAATGGAACA
CAGACTGTTT CATTTGAAAA GGCTGAAGAC ATCAACGAAC TGGCTTTTAA GACCCTTGAC
CAGCGTTTTG TGAAGGAGAT GGGCAAGGTG CTGACCCGCC TGGCTGTTAA AAAGAGTGCA
GAATACGCCT TAAGGCAAAG CGCCAAAGGA AATGGTAAGG ATGGGAAAGA CAATTCTCTG
CTGGAAGGCC TGGGCATTGG CATGCAGTTG TACAGCCTGC TTTCAGAAAA GGCCGACACA
AGGAACTGGC AATCGCTTCC GGCCAACATC AGTTATACCC GTATTCCACT TAAAAAAGGT
GAAAATACCC TGACCCTGGA CTTAAAAGGC GCTGGTGGAA ACAGTGATTC CAAAACGATA
ACCGTTAACG GTACAGGAAA ACTTCAGTTC TATAATTATT CAACTTTACG CTGA
 
Protein sequence
MINIRRNIFK ASFFLGLVLF LSGCASYNDM IASYYKQIAA GNYTEAVKEL DKNKLLQKPR 
NKLLFLMEKG KASHLSGDYE NSNRYFNEAD QLLENGIGGA MDAVVGTLVN PMTQSYKGED
FEKFMIHYYK ALNYVYLGLN EDAIVEARRI TLQSQEQGDK FNDKDSRYSK DAFSLMLQGL
IYEQDGDINN AFIAYRNAAE VYLNSKDQTY YGVKIPAELK QDVLRMADRN GFTAELSRFE
ALFGMKYQAE PKPEGGELIF FWENGLAPVK KQEELFFSLI KGSNGDLFFT NLGGTIIIPF
NHTYSNSNFS LNGVESLRAT YPKYQAQPPH YSSATLSNGT QTVSFEKAED INELAFKTLD
QRFVKEMGKV LTRLAVKKSA EYALRQSAKG NGKDGKDNSL LEGLGIGMQL YSLLSEKADT
RNWQSLPANI SYTRIPLKKG ENTLTLDLKG AGGNSDSKTI TVNGTGKLQF YNYSTLR