| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0057 |
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| Symbol | |
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| ID | 8251141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 60198 |
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| End bp | 61661 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644933706 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003090345 |
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| Protein GI | 255529973 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA GATCATTTAT AACCAAAATA GCTGTTGTGC TGTTCGTGCT GACTGCTTTA
AATGCCTGCA AAAAAGACTT TCTGAACGTT AATCCGAAGG GAAAACTGAT TGCTTCAAAA
ACCGCTGAAT ATGACCTGAT GTTTAACTGG GGCGCGATCC GCATCGGCCT TCCAACTTCT
GCAGTAATTA TGGGCGACGA TGCCATTGTT GCCGATCCGC TTTATGCCAA GGCCACACTG
AGAACGCAGC GCTTTTTCCG CTGGGAAGAT GAGGTGTATG AACCGGAAGA CAATGCCACA
GAGATGAGCC TGCTGATGCC CAAGATCTAT ATTTACAACA AAGTGATCAA TGAGGTGATG
GATTCTGAAG GCGGTTCTCA GCAGCAAAAG GCAGAACTGC AGGCCGAAGC CTATGCCAAC
CGCGCCTGGT CATATTTCAT GCTGATCAAT TATTTTGGTC TACCTTACAA TGAAACAACC
TCTAAAACAG ATCCGGGCTA TCCGATCATT ACTGCCGCAG ATGTGGCAGA AACAAAATTT
ACCCGGGCTT CGGTAGCCGA AGTATATGAT TTTATTATTG ACGACCTTAA AAAGGCCATT
GCTGGCTTGC CCCCCCAATC TGCGGCCCGC GTACGGATGT CCAAAGCCGC AGCAGAGGCC
ATATTGGCTA AAGTATATGT ATTTATGGGC CGCTATACGG AGGGCCTTAC CCAGATCAGC
AATGCATTTA CGCACCTGCC CACTAATTTT GTGGTTAAAT TATATGATTA CAATGTAACC
CTGGCTACAG GTGGTACCTG GGGCTATAAT GTGACCACCA CCCCTAAAGC TTATTTATCA
GGTGTACCTT CTGGAGACCT GCACGAAGAG ACTTTGCTGG ACCGGGGCTT TAACAATAGC
TGGTCGTTAA ACGGGGCCGA CATTTTGCTG GCGCCCGAGG TTGTGGCTTT GTATACCGCA
AATGATACCC GCCTTAAGCT GTTCTCCAGC CAACCTTACG GAGGCGGGAC CATCTTATCA
CCAAATCCTC CCGGAGCCCC GGCCCCGATG CGGGCCATCG GTTTTTACAA CACACAATAT
GGTGTTCGCT TAGCCGAAAT GTACCTGCTG AGTGCAGAAT GTAAAGCCCG TACGGGCGAC
ATCGGCGGAG CTGTAACCGA CCTGGAGGCC CTGAGAAAGA AAAGGATGCC TGCAACCAGC
GCTACCGTAA GCATTACCGA TAAAGATGCG CTGATCCGCT TTATCATAGA CGAGCGGACA
CGGGAGCTTT CTATGCAGGG TTATCGCTGG TTTGACATGC GCCGTCTGTA TAAAGATCCT
TTATTTGCCG GCAAAATGCC TTATACCCAC AAATATGTAT CGGCAACAGG GGCGGTAACT
ACCTATACTT TAAAACCTGA AAGGTTTGCC ATTCGTTTTC CTCAAAGCGT GATCAATGCC
AATCCGGGAA TGAAAAACAA TTAA
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| Protein sequence | MKKRSFITKI AVVLFVLTAL NACKKDFLNV NPKGKLIASK TAEYDLMFNW GAIRIGLPTS
AVIMGDDAIV ADPLYAKATL RTQRFFRWED EVYEPEDNAT EMSLLMPKIY IYNKVINEVM
DSEGGSQQQK AELQAEAYAN RAWSYFMLIN YFGLPYNETT SKTDPGYPII TAADVAETKF
TRASVAEVYD FIIDDLKKAI AGLPPQSAAR VRMSKAAAEA ILAKVYVFMG RYTEGLTQIS
NAFTHLPTNF VVKLYDYNVT LATGGTWGYN VTTTPKAYLS GVPSGDLHEE TLLDRGFNNS
WSLNGADILL APEVVALYTA NDTRLKLFSS QPYGGGTILS PNPPGAPAPM RAIGFYNTQY
GVRLAEMYLL SAECKARTGD IGGAVTDLEA LRKKRMPATS ATVSITDKDA LIRFIIDERT
RELSMQGYRW FDMRRLYKDP LFAGKMPYTH KYVSATGAVT TYTLKPERFA IRFPQSVINA
NPGMKNN
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