| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0056 |
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| Symbol | |
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| ID | 8251140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 57372 |
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| End bp | 60188 |
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| Gene Length | 2817 bp |
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| Protein Length | 938 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644933705 |
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| Product | peptidase M16 domain protein |
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| Protein accession | YP_003090344 |
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| Protein GI | 255529972 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.456752 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAATC ATTTTTTATT TTTTACTGTA ATGCTATTGT ATGCTGTACC GTTAATGGCA
CAGCATACAA CAAAAACCAC CGCTAAGGCC GGATTGTTGC CGGTAGATAC GGCAGTTAAA
ATCGGGAAGC TGCCCAATGG GCTTACTTAT TACATTCGTA AAAACAGCGA ACCGGCAAAA
CGGGCTGTCC TGTACCTGGT TACACATGTC GGTTCCTTAA TGGAAGATGA TGACCAGCTG
GGCCTTGCCC ACTTTACAGA ACATATGGCT TTTAACGGTA CAAGGGATTT CCCTAAAAAT
GAACTGGTCA ATTACCTCCA AAAGGCCGGG GTAAAGTTTG GTGCGGATGT AAACGCTTCT
ACTTCTTTTA ATGAAACGAT ATACAAGCTC CCTTTGCCAA CAGATAGTAT GGCCGTTTTT
AAAAAGAGCT TCAGCATGAT GGCCAACTGG GCAGGACTGG TTACTTTTGA AGAGGGGGCA
ATAAACAGGG AGCGCGGGAT CATTTTAGAA GAAGAACGCT CAAGGGGCAA AAATGTGGCA
GAACGCATTC AGAAACAGGT AATACCTGCC TTGCTGAACA ACTCCAGGTA CGCCAGTCGC
ATGCCAATTG GCAAAGATGA GCTGTTAAAA ACCTTTAAAC CTGATGTGAT CAAAAGGTTT
TATAAGGACT GGTACCGGCC CGACCTTCAG GCCGTTATTG CCGTTGGTGA TTTTGACCCG
AAGCTGGTAG AAAGGCTGAT CAGGGAAAAT TTCAGCACTT TAAAAAATCC GATGCACAGC
AGGAAAAGAA TAAACTATTC CATTCCCCCT GATAAAGGCA CACAAATAAA AATCATTACA
GACCCCGAGC AGACCAGTAC CAGGATGCAG ATCATTGTAC GGCACCAGGG TAAAGCGGTC
AGAACCAGTG CCGATTTGAT AGAATCATTA AGCCGGAGCC TGCTGAACCG GATGTTGGGT
AGCCGTGTTG CTGAACTGAG ACAGCAGGCC AATGCTCCCT TGCTGATCGG CTCTATTGGT
TATGGCCGCT TTCTGGCTGA TATTGATGCC TTTACAATTG CGGTAACCGC CAAGCCGGGA
CAGTTGGAAC AGGCAGCAAA AAAAATACTT GCGGTTAATG AACAGGCCAG GCAATTCGGG
TTTACCCAGG CTGAACTGGA AAGTGCAAAG AAATCGCTTT TCAATACCAT AGAAAGACAA
TGGAAAGAAC GCGACAAGAA CAGTTCTGCC GCTTATGTGA CCGAATACCT GAATCACTTT
ACAAAGGGAG AAGCCATTCC CGGCATCGAT TATGAGTATC ATTTCCTGAA AAATAACCTC
GCTAAGATTA AGCTTGAGCA ACTGGATAAA CTGATCCGCG CTTTGAACAG CACAGAGAAC
CGGGTAATTA TTATAGAAGC GCCGGAAAAG GACAAAGCCC TGCTTCCTGA TCAAAAAAAA
CTGCTTTCCT GGATCAGTGA TTCCGGCAGG AACCTGCAGC CCTACCGGAG CGAGGCCGTT
CCATCAAAAC TGCTGGACAA CCTACCGGAG GGCGGTGTTA TAAGTGCGGC AAAAACCAAT
GTCGGCACCG GGGTTTCCGA ACTCATTTTA GGCAATGGTG CCCGGGTAAT ACTCAAACCG
ACACGTTTTA AAAATGACCA GATCATCATC AATGGATACA GTTATGGCGG TACATCTATT
GCCGCAGATT CTATATATCA TTCAGCCGCG CTGGCAGCAT TACTGGTAAA CCGGAGTGGC
CTGGGCAAGC TGACACGGGC ACAGCTGAAT AAAATGCTGA GCGGCCGTTC GGTAAATCTT
TCGGCCTCCA TCAGCGACTT TACAGAAGGT CTGAGTGGAA GTGCCTCGCC GGCTGAACTG
GAAACAGCAC TGCAATTGAT ATACCTGTAT TTTACACAGC CCCGCAAAGA TCCTGAGGCC
TGGTTGGCCA TCATTTCACA ACAGGAAGCC AGTATGGCCA ACCGAAGTGC AAGTCCTAAC
CTGGTTTTTC AGGATACCGT TACAGCTGTT TTAAACAGCT ATAACCCCAG AAAAACAGCG
GGAAACCTGG ATGGTACATC GATAGACCAG GCTTATCGTT TCTATCAGGA TCGTTTTGCT
GATGCCAGTG ATTTTACTTT TATACTGGTG GGGGCGATAG ATACGGCAAA GGCCATTCCC
CTGATCAAAA AATACCTGGG AAACCTGCCG GCCATCCACA GAAAAGAGCA CTACAAAGAC
GCTGGCTTTG GCACGCCCAG GGGCCAGGTA AGCAAAACCG TTTATAAGGG TATCGAAGCA
AAAAGCAGGG TGCAGCTGGT ATATAGCGGC ACTTATACCT ACAATGACCT GAACAACATT
CAGTTGGAAG CCTTAAAGGA AATGATCAAT TACAGGATCC TGAACCGTTT AAGGGCAAAA
GAAAGCGGTG TATATACCCC ATCTGTAAAT GTGGGTTATG GCAATATCCC CGTTCAAAGA
TACAGCATCA CCATCAGCTT TAACTGTGCC CCCGAAAATG TACAGCATTT AATTGAGGCC
AGCAAAGAAG AAGTGGAGCG CTTAAAAAGA GAAGGGCCCG AACCGGCAGA AATACAGAAG
TTTATGGCAG CGCAACTGCG CATGCGCGAA ACGCAGGTGG AAAGCAATAC CTGGTGGGTA
TATTACCTGA GAAACCAGTA CATGAACAGG GATAAACCCG AAACAGAACC GTCCTACAAT
AAGCTTCTTG GTGAAGTAAG CCCTGAAAGT GTCCGCACTG CTGCGCGGCA ATATGCCGGT
GGCGAAAATC TGGCCGAATT TATCTTAATG CCGGAAAAGA AAGGCCCCCG CCATTAG
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| Protein sequence | MKNHFLFFTV MLLYAVPLMA QHTTKTTAKA GLLPVDTAVK IGKLPNGLTY YIRKNSEPAK
RAVLYLVTHV GSLMEDDDQL GLAHFTEHMA FNGTRDFPKN ELVNYLQKAG VKFGADVNAS
TSFNETIYKL PLPTDSMAVF KKSFSMMANW AGLVTFEEGA INRERGIILE EERSRGKNVA
ERIQKQVIPA LLNNSRYASR MPIGKDELLK TFKPDVIKRF YKDWYRPDLQ AVIAVGDFDP
KLVERLIREN FSTLKNPMHS RKRINYSIPP DKGTQIKIIT DPEQTSTRMQ IIVRHQGKAV
RTSADLIESL SRSLLNRMLG SRVAELRQQA NAPLLIGSIG YGRFLADIDA FTIAVTAKPG
QLEQAAKKIL AVNEQARQFG FTQAELESAK KSLFNTIERQ WKERDKNSSA AYVTEYLNHF
TKGEAIPGID YEYHFLKNNL AKIKLEQLDK LIRALNSTEN RVIIIEAPEK DKALLPDQKK
LLSWISDSGR NLQPYRSEAV PSKLLDNLPE GGVISAAKTN VGTGVSELIL GNGARVILKP
TRFKNDQIII NGYSYGGTSI AADSIYHSAA LAALLVNRSG LGKLTRAQLN KMLSGRSVNL
SASISDFTEG LSGSASPAEL ETALQLIYLY FTQPRKDPEA WLAIISQQEA SMANRSASPN
LVFQDTVTAV LNSYNPRKTA GNLDGTSIDQ AYRFYQDRFA DASDFTFILV GAIDTAKAIP
LIKKYLGNLP AIHRKEHYKD AGFGTPRGQV SKTVYKGIEA KSRVQLVYSG TYTYNDLNNI
QLEALKEMIN YRILNRLRAK ESGVYTPSVN VGYGNIPVQR YSITISFNCA PENVQHLIEA
SKEEVERLKR EGPEPAEIQK FMAAQLRMRE TQVESNTWWV YYLRNQYMNR DKPETEPSYN
KLLGEVSPES VRTAARQYAG GENLAEFILM PEKKGPRH
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