Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0053 |
Symbol | |
ID | 8251137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 54692 |
End bp | 55399 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644933702 |
Product | hypothetical protein |
Protein accession | YP_003090341 |
Protein GI | 255529969 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.935944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.582705 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTAA CAATTAATTT AAAAACGATA TTCAAAACAT TTATAGCTGC GGTTACCTTA TCAGTAGTTT TTGTGGCCTG TTCAAAAGAC AGGAGTGAGC CTCAGCAGGT AGCGGGGCTT TCTATTATCA TGGCCTATCC GGATACCACA ACTTTAGATT TTATCGTCGA TCAAACAAGG GTAAACAATG CTAAAGGGTT GAACTTTAAC GGAAAAATTG ATTATTTAAA CCTATTTCCC GGAAACAGAA GGCTGGGCAT CACCAAAAGA AATTCCAACA GGTTAATCAT GTCCGAGAAC TTTAACCTGC TTTCAGGGGT TGGCTATTCT ATTTTTGTGG TAGATACCGT TAAGGATAAT ACCAAAAGAT TTCTTTTGAC AGAGGACGAT CTGAGTGCTC CTGCTGCAGA TAAAGCAAAA ATCCGCTTCA TCAATTTAAG CAAGGATGCC CCTGCATTGA GCCTTAGGAT ACATGGAAAA GATGCAGACC TGTTTACCGG TAAAGCATTT TATGAGTATA CCAGCTTTTC TGCTGTTGAC CCGGGCGAAA GTGTAACCTT TGATGTCAAC GAGGGAACAA CACTTAAAAC CAGTTTGCCG AATGTTAAAA TAGAAAAAGG GAAAATTTAT ACCATTTACG CCAAAGGGTT TCAGGCTGCT GCAATAGATA GCTTAAAACT GCGTGCTGCA ATTTACACAC ACAAATAA
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Protein sequence | MKLTINLKTI FKTFIAAVTL SVVFVACSKD RSEPQQVAGL SIIMAYPDTT TLDFIVDQTR VNNAKGLNFN GKIDYLNLFP GNRRLGITKR NSNRLIMSEN FNLLSGVGYS IFVVDTVKDN TKRFLLTEDD LSAPAADKAK IRFINLSKDA PALSLRIHGK DADLFTGKAF YEYTSFSAVD PGESVTFDVN EGTTLKTSLP NVKIEKGKIY TIYAKGFQAA AIDSLKLRAA IYTHK
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