Gene Phep_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0052 
Symbol 
ID8251136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp53993 
End bp54457 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content42% 
IMG OID644933701 
Producthypothetical protein 
Protein accessionYP_003090340 
Protein GI255529968 
COG category[S] Function unknown 
COG ID[COG4696] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.455768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.402924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAGC CGAATTCATT AAACCAGGTT GCTGAATTTC ATAAAACCTT TAAGCACCCC 
ATAAAAGAAA CACCAGGCAT TCCTTCCCGG GAAAGGGCCA ATTTAAGGGT TTCTTTACTT
GCTGAAGAAC TCCATGAATT GAAACAGGCG ATTGAGGCGA ACGACTTTGT AGAAGTTGCC
GATGCACTAT GTGACCTGCA ATATGTGCTG GCTGGTGCCA TTCTCGAATT CGGACTGGGT
GATAAGTTCA AGTCTCTTTT TGATGAAGTC CACCGTTCCA ACATGAGCAA AGCCTGTAAA
TCGCTTGAAG AAGCGAATGA AACAATAGCG CATTACAGAA AAAACCACCA GTGCGATGCT
TATCATAAGG AAGAAGAAGA ATTGTTCCTG GTATACAGGT CCAATGACGA CAAGACCTTA
AAATCCATCA ATTATTCGCC TGCTGATCTT AAAAGCATGC TATAA
 
Protein sequence
MQEPNSLNQV AEFHKTFKHP IKETPGIPSR ERANLRVSLL AEELHELKQA IEANDFVEVA 
DALCDLQYVL AGAILEFGLG DKFKSLFDEV HRSNMSKACK SLEEANETIA HYRKNHQCDA
YHKEEEELFL VYRSNDDKTL KSINYSPADL KSML