Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0052 |
Symbol | |
ID | 8251136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 53993 |
End bp | 54457 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644933701 |
Product | hypothetical protein |
Protein accession | YP_003090340 |
Protein GI | 255529968 |
COG category | [S] Function unknown |
COG ID | [COG4696] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.455768 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.402924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAGC CGAATTCATT AAACCAGGTT GCTGAATTTC ATAAAACCTT TAAGCACCCC ATAAAAGAAA CACCAGGCAT TCCTTCCCGG GAAAGGGCCA ATTTAAGGGT TTCTTTACTT GCTGAAGAAC TCCATGAATT GAAACAGGCG ATTGAGGCGA ACGACTTTGT AGAAGTTGCC GATGCACTAT GTGACCTGCA ATATGTGCTG GCTGGTGCCA TTCTCGAATT CGGACTGGGT GATAAGTTCA AGTCTCTTTT TGATGAAGTC CACCGTTCCA ACATGAGCAA AGCCTGTAAA TCGCTTGAAG AAGCGAATGA AACAATAGCG CATTACAGAA AAAACCACCA GTGCGATGCT TATCATAAGG AAGAAGAAGA ATTGTTCCTG GTATACAGGT CCAATGACGA CAAGACCTTA AAATCCATCA ATTATTCGCC TGCTGATCTT AAAAGCATGC TATAA
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Protein sequence | MQEPNSLNQV AEFHKTFKHP IKETPGIPSR ERANLRVSLL AEELHELKQA IEANDFVEVA DALCDLQYVL AGAILEFGLG DKFKSLFDEV HRSNMSKACK SLEEANETIA HYRKNHQCDA YHKEEEELFL VYRSNDDKTL KSINYSPADL KSML
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