Gene Phep_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0047 
Symbol 
ID8251131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp49168 
End bp49413 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content41% 
IMG OID644933696 
Productnitrogen-fixing NifU domain protein 
Protein accessionYP_003090335 
Protein GI255529963 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0694] Thioredoxin-like proteins and domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.424143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTAA CAGAACAAGT AGAGCAGGCA CTGGAAACCA TCAGACCTTA TTTAATAGCT 
GATGGAGGAG ACGTAGCCAT AGAAGAGATT ACGCCGGAAA ATGTAGTTAG ATTGAAATTA
TTAGGTAACT GCGGATCCTG CAAAATGAGT TTTATGACCA TGAAAGCAGG GATTGAACAG
GCCATCATGA AGTCTGTTCC ACAAATTACT GCTGTTGAAG CCGTTAACCT TGCCGAACCG
GTATAA
 
Protein sequence
MNLTEQVEQA LETIRPYLIA DGGDVAIEEI TPENVVRLKL LGNCGSCKMS FMTMKAGIEQ 
AIMKSVPQIT AVEAVNLAEP V