| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0042 |
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| Symbol | |
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| ID | 8251126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 43308 |
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| End bp | 44435 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644933691 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003090330 |
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| Protein GI | 255529958 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.634821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.103785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATGG ACTATCAATT TTTTGAACAG GTTTTTTGGG GAAACACCGT TAAGCAATAT
TGCGTTTTTG TAGTTATTAT TTTACTTGGA TTGCTGTTTA AAAGATTGGT GTCCAGGTTG
TTTAGTCTGG CCCTTTTTAA GGTGTTCAGC AAATTTGCGG AAGAGGTCAG GGGAGAAACC
TTTGTTGCGC TGCTGGTAAA GCCTATAGAG TCTTTCATTA CTTTTTGCAC CATTTATCTG
GCGATCAACA ATTTAACCCA CCCCCTTAAC CTTGTGCTCT GGCACAGGTC GAAAACTAAG
ATTGGGGTTA CGATAGGGGA TTGCCTGGAT AAGATCTTTC TTTTCCTGAT TATTCTGTCC
ATTTTCTGGA TCATCCTGAG GATCATTGAT TTCATCGCTT TTGTATTAAA ACACAAGGCA
AGCATAATGA ATAACCGGGC CGATGATCAG TTGGTCCCTT TTTTAAAAGA ACTGACCAAA
ACCTTGATCT GTTTTCTTGG TTTTTTTGTG TTACTGGGCT TTGTTTTTGA AATCAATGTG
CTTACACTGA TCACGGGATT GGGTATAGGG GGTATTGCGA TTGCACTGGC TGCAAAAGAA
AGTCTGGAAA ACCTGATCGG TTCATTTACG ATATTTTTGG ACAAGCCCTT CACGGTTGGC
GATGTGGTAA AGGTGGATGG TATTGAAGGT ACAATTGAGA AAGTGGGCTT CAGGAGTACC
TGGCTGATCA GTCCGGATAA AACAACTATT GTTATTCCAA ACCGGGCAAT GATAGATGGT
GTGCTTGAAA ATGTGACGTT AAGAAATTAC AGAAGGGTTA ATTTTTTTAT AGGAATAGTC
TATGAGACGG CGCCTGAGGA TATTAAAAAG ATCCTGTCTG CCATTGCTGC TTTTCTTGAG
GCCCATCCTG ATACTAAGGA CGGATATGCC ACATTTGATA ATTTTGGCGA TTCTGCCTTG
CATATCCAGG TTGTTTACCT GGTGATCAAT ATGGAGCACA GTAAATATGT AAAAGTAAAA
GAAGAGATCA ATTTTAAACT AATGGAGATT GTAAAAGAAT TCAGGTCTGG GTTTGCCTAT
CCGACCCAGC GCTCTATCAG TGACAGCTTT CCGCAGCAAA ACAGTTAA
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| Protein sequence | MMMDYQFFEQ VFWGNTVKQY CVFVVIILLG LLFKRLVSRL FSLALFKVFS KFAEEVRGET
FVALLVKPIE SFITFCTIYL AINNLTHPLN LVLWHRSKTK IGVTIGDCLD KIFLFLIILS
IFWIILRIID FIAFVLKHKA SIMNNRADDQ LVPFLKELTK TLICFLGFFV LLGFVFEINV
LTLITGLGIG GIAIALAAKE SLENLIGSFT IFLDKPFTVG DVVKVDGIEG TIEKVGFRST
WLISPDKTTI VIPNRAMIDG VLENVTLRNY RRVNFFIGIV YETAPEDIKK ILSAIAAFLE
AHPDTKDGYA TFDNFGDSAL HIQVVYLVIN MEHSKYVKVK EEINFKLMEI VKEFRSGFAY
PTQRSISDSF PQQNS
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