| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0001 |
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| Symbol | |
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| ID | 8255424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 7 |
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| End bp | 1260 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644933650 |
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| Product | PDZ/DHR/GLGF domain protein |
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| Protein accession | YP_003090289 |
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| Protein GI | 255529917 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTTGT TAATGAGCAG GATTAATTTC GGTAAACTTA TCTTATTCCA GCTTATCCTG
GCCTTTCAGA TCGGCATCGC AATTCCTGCC CGGGCACAGC AGTTCCATTT CACAGAAAAC
AAGATCAAGG ATGCTATCCG GTTTACGATG GTAAAGAACC TGGTGATCAT CCCAGTTTAC
CTGAACGGCC AGGGGCCCTT TAATTTTATT CTAGACACCG GCGTTGGCCC GCTGATCATC
ACCGATCCGG CATTGATTGA TAGTCTTGGC CTGAAGGTTT CACGTTCCAT TAAAATCTCG
GGCCTGGGAA AGGGGGAAGA AATTGATGCA TTTGTTTCAA ACGAAATCTC TGCAAACGTG
GGGAAGGCGG CGATTGAGCA TATCCCTGCA GCGATCTTAA AAAAGGATAT TTTCGGTTTA
TCCAATTACC TGGGCACAAA GATCTACGGA CTGCTGGGGT ATTATTTTTT TAAAAGTTTT
TTGGTACAGA TCAGGTACTC CCAAAAAAGG TTATTGTTTA GCTACCCTGC TGCGGTCCGT
AAAATCAAGG GAGAAAGGGT GTCCATTGAA ATTGTAGGTT ATAAACCTTA TGTCAATATT
GACATGGAGA CCGCTGACCA TAAAAATATA ACGATAAAAA TGCTGGTAGA CAACGGGGCA
AGTCATGCCA TATCTTTGGA AAGGCTCAAT GAGCGCCCTT TCCCCGTGCC TTCAACGTCT
ATTCCCGCCA GTCTTGGTGT AGGCATGAGC GGGCCTATCG ACGGCAGCAT TGGCCGGATC
CCTTCCTTAA CCATTGGCGG GGTTGTGCTC AAAAATATTT TGGCATCTTA CCCCCACTAC
GATGATGTAG CTGCCAAAGT GATACTGAAA GACCGCAATG GTAATTTAGG GGCCGATGTA
TTGAGCCGTT TTAACATCAC TTTTGATTAC GAAGACAATT CTGTATACCT GAAAAAGAAC
AGCCTGTTTA ACCGGCCTTT CGAACATGAC ATGTCGGGCA TAGAGGTATA CCTTCAGGAG
GGCAAGAAAA AACATTATTT CATCAGCAGG ATCGAACCCG GGTCACCAGC CGAAAAAGCG
GGGATACAGG TAGATGACGA GCTCATTTCC ATCAATCTTA TGCCTGTTAT GAGTTATAAA
CTGGATGAAA TCAGCAACCT GTTCAAAGCT GCCGACGGCA AACAGATGAT CCTCACCATT
GTAAGGAACA ATGAGCTGAT GATTAAGGTT TTTAAGCTTA AACAAAGAAT TTAA
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| Protein sequence | MMLLMSRINF GKLILFQLIL AFQIGIAIPA RAQQFHFTEN KIKDAIRFTM VKNLVIIPVY
LNGQGPFNFI LDTGVGPLII TDPALIDSLG LKVSRSIKIS GLGKGEEIDA FVSNEISANV
GKAAIEHIPA AILKKDIFGL SNYLGTKIYG LLGYYFFKSF LVQIRYSQKR LLFSYPAAVR
KIKGERVSIE IVGYKPYVNI DMETADHKNI TIKMLVDNGA SHAISLERLN ERPFPVPSTS
IPASLGVGMS GPIDGSIGRI PSLTIGGVVL KNILASYPHY DDVAAKVILK DRNGNLGADV
LSRFNITFDY EDNSVYLKKN SLFNRPFEHD MSGIEVYLQE GKKKHYFISR IEPGSPAEKA
GIQVDDELIS INLMPVMSYK LDEISNLFKA ADGKQMILTI VRNNELMIKV FKLKQRI
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