Gene Dfer_5794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5794 
Symbol 
ID8229410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6955879 
End bp6956937 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content48% 
IMG OID644933639 
ProductMethyltransferase type 12 
Protein accessionYP_003090147 
Protein GI255039526 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG AATTGTCGGC TATCGAAGCC AAGTATGAAG CACAGAAGAT CGCGTTCGGC 
CCGATGTACT TTCAGTCGGT GGTGGCACTC AGGGACCTCG GTATTTTGCA ATATATCAGC
GAAAACCGCA AGGGAGTGAG CATTGCCAGG ATCATCGAAA ATGTGAATGT CTCGGAATAC
GGCGTGACCC TATTGCTGGA AGCGGCGGAA ATTCTCGGCG TGGTGGAAAT AGAAAATGAC
GTTGTCCGGA TCAGCAAGAT CGGTTTTTTC CTCTTGAAGG ACGAAATGAC GCGCGTGAAC
ATGAATTTCA TGAAAGACGT GTGCTACCTC GGCGCGAGCC ACATGACCGA AAGCATCGTG
AACGGGAAGC CCGAAGGCCT GAAAGAACTT GGCAACTGGC CGACGATCTA CGAAGGCCTC
TCCATCCTGC CCGAGCCCGC CAAAACTTCA TGGTTCGAAT TTGACCATTA TTATTCCGAC
AATGCATTCC CCGACGCGCT GAAAATCGTG TTTTCGAAAA AACCGAAACT GATCTTCGAC
GTGGGCGGAA ATACCGGTAA ATGGTCGTTC GCGTGCTGTG ACCATGATCC GGATGTGAGG
ATTAAAATAC TCGATCTGCC GGTGCAGCTC AATGTAGCCC GTGCCAACGC CACCGAAAGA
GGCCTGCTCG ACCGGATTGA TTTCCACGCG ATCGACCTGC TCGATACAAC GCAGAAAATT
CCGCAAGGTG CCGATGTGAT CTGGATGAGC CAGTTTTTGG ATTGTTTCTC GAAAGAACAG
ATCGTTGCCA TACTTGAAAA CGCCCATCAG GCCGCTACCG AAAACACCAC TTTGTACATT
CTGGAACCAT TTTTTGATAA CCAGAATTAT CCTGCTGCAC ATTATAGCCT GGTGGCTACA
TCTTTGTATT TTACAATTAT GGCCAACGGC AACAGCAAAA TGTACAGGAT CGGTGTGATG
AAGGAACTGG TATGCCAGGC TGGGTTTGAA GTAGTTGAAA CTTATCCATT GATTGGCGAC
AGTTATCATA CGATTCTGGA ATGCAGGAAA AAGGCATAA
 
Protein sequence
MKKELSAIEA KYEAQKIAFG PMYFQSVVAL RDLGILQYIS ENRKGVSIAR IIENVNVSEY 
GVTLLLEAAE ILGVVEIEND VVRISKIGFF LLKDEMTRVN MNFMKDVCYL GASHMTESIV
NGKPEGLKEL GNWPTIYEGL SILPEPAKTS WFEFDHYYSD NAFPDALKIV FSKKPKLIFD
VGGNTGKWSF ACCDHDPDVR IKILDLPVQL NVARANATER GLLDRIDFHA IDLLDTTQKI
PQGADVIWMS QFLDCFSKEQ IVAILENAHQ AATENTTLYI LEPFFDNQNY PAAHYSLVAT
SLYFTIMANG NSKMYRIGVM KELVCQAGFE VVETYPLIGD SYHTILECRK KA