Gene Dfer_5790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5790 
Symbol 
ID8229406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6952450 
End bp6953700 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content54% 
IMG OID644933635 
Productphenylacetate--CoA ligase 
Protein accessionYP_003090143 
Protein GI255039522 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCG AAACACAGCA GCCCGCGTTG CAGCAGCTTT TGTTGCACGT TTCCAACTAT 
TCCAATTACT ACAAGCGTAT TTTCCGCGAA CAGAATATCA ATGTCGACGC GATTAAAACC
GTGGCCGATC TGGCGCAGCT GCCGTTCACG ACCAAAGACG ACCTTGCCCA ATACAACGAC
GATTTCCTGT GCGTGCCCAA AAGCCGCATT ACCGATTTCG TGACCACGTC CGGAACGCTC
AGCGATCCGG TAGCATTTTA CCTCACCGAT TCGGATGTGG AAAGGCTGGC GACGAACGAA
GCGGCGTCGT TCCAATGCGC CGGCGGTTCG GAAAGCGACA TTTACCAGCT CATGACCACC
ATCGACCGCC GGTTTATGGC CGGACTGGCC TATTGGATGG GTGCACGCAA AATGGGCGCG
GGTATGATCC GCGTCGGTCC GGGAGCCCCT TTCCTGCAAT GGGAGTCGAT CCAGCGGTTT
TCGCCCACGG TGATCATCGC CATCCCGTCG TTCATCCCTA GACTGATCGA CTATGCGATT
GCCAATGAAA TCGATTTCGC CGCTTCGAGC ATTCAATCCA TCATTTGCAT TGGCGAACCC
ATCCGAAACC CGGATTTCAC GCTGAATGAG CTCGGCAAGC GCATTACCTC GCAATGGGAC
GTGAAGCTCT ATTCGACTTA CGCGTCTACT GAAATGGGTG CGGCCTTTAC CGAATGCGGA
GAGGGCAAAG GCGGCCATTT GAACCCCGAT CTGCTGATCC TCGAAGTGGT GGACGACGAA
GGGAATGCGG TGCAGGATGG CGAGCTCGGC GAAGTAGTAG TGACCACGCT CGGCGTGGAA
GGCATGCCGC TGCTGCGGTA CAAAACGGGC GATCTTTGTA ATGTCTATTA TGCACCGTGC
GCGTGCGGGC GCACGAGCCC GCGCCTGGGG CCGGTGGTCG GCCGCAAGCA GCAAATGATC
AAGTTTAAGG GCACGACCAT CTTTCCGCCG GCATTGTTCG ATGTGCTCGA CGCCGTGAAG
GAAATCGAAT TATACCAGGT AGTCGTTTCG AAAAACGAGT TCGGAAACGA CGAAATTACG
GTGGTGCTGC CCATGCAATT ACAGACCTCG GCATTCAAGG AAACGATGCA TTCGCTGTTC
AAATCGAGGC TCCGGGTGTC GCCTGCATTA ACTTTCGTAA CCGCTGAAGA ACTAACTTTC
CGCATCTACA AACAGGAGAA GCGCAAACCT GAAAAATTGA TCTATATTTG A
 
Protein sequence
MSSETQQPAL QQLLLHVSNY SNYYKRIFRE QNINVDAIKT VADLAQLPFT TKDDLAQYND 
DFLCVPKSRI TDFVTTSGTL SDPVAFYLTD SDVERLATNE AASFQCAGGS ESDIYQLMTT
IDRRFMAGLA YWMGARKMGA GMIRVGPGAP FLQWESIQRF SPTVIIAIPS FIPRLIDYAI
ANEIDFAASS IQSIICIGEP IRNPDFTLNE LGKRITSQWD VKLYSTYAST EMGAAFTECG
EGKGGHLNPD LLILEVVDDE GNAVQDGELG EVVVTTLGVE GMPLLRYKTG DLCNVYYAPC
ACGRTSPRLG PVVGRKQQMI KFKGTTIFPP ALFDVLDAVK EIELYQVVVS KNEFGNDEIT
VVLPMQLQTS AFKETMHSLF KSRLRVSPAL TFVTAEELTF RIYKQEKRKP EKLIYI