| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5787 |
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| Symbol | |
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| ID | 8229403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6947530 |
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| End bp | 6950010 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644933632 |
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| Product | LmbE family protein |
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| Protein accession | YP_003090140 |
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| Protein GI | 255039519 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.462523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCGTT TCTTTACGTT CGCCCTCGTA CTCTTTGCTA CCCGGCTTTT CGCGCAGACT
CCCGCGCTCT CATCGAGTGA AATTTTCCAG AACATCAAAA AGCTCAATGT GTTGGGCTCC
GTGCTCTACA TCGCCGCCCA TCCCGACGAC GAGAACACGC TGATGCTCTC CTACTTATCC
AAAGACCAGC TCGTGCGCAC CGGCTACCTG TCGCTCACGC GCGGCGACGG CGGCCAGAAC
CTCATCGGCG CCGAGCAAGG CTACAATATC GGCGTGATCC GCACGCAGGA ACTGCTCGCA
GCCCGGCGCA TTGATGGCGC CCAGCAGTTC TTTTCGAGGG CTTACGACTT TGGTTTTTCC
AAAACCCGCG ACGAAACGCT CCACTTCTGG GACCGTGAAA AAGTACTTGG CGACGTGGTG
TGGATGATCC GGAAATTCCA GCCCGACGTG ATCATTACCC GCTTCCCGCC CGATCCGCGC
GCCGGCCACG GGCACCACCA GACGTCAGCG TACCTGGCCG AGGAGGGTTT CGGCCTGGCA
GCCGATCCGA AGGCCTATCC CGACCAGTTG AAATTTGTGA AAACATGGCA AACCAGGCGG
TTGGTTTGGA ATACATTCAC CCCGGGCTTC ACCAACAAAG CGCCCAGCGA AGAGAAAAAC
CCGTTTATTT CCATTGAAAT CGGTGGTTAT AACCCGGTTT TGGGCAAATC ATACACCGAA
ATCGCTGCAC TGAGCCGCAG CCAGCACCGC AGCCAGGGCT TCGGCAGCGC CCCGCACCGT
GGCGACCGCA TCGATTATTT CCTGCATAAA GTAGGCACGC CGGCTGAAAA AGGCCTTTTC
GACGGCGTGG ACCTCAGCTG GAAACGCTTG AAAGGCGGCG AAAAAGTACA GGCGCTGATT
ACAGCGGCGA TCAAAAACTA TTCGGTGAAC AAACCATCGG CGAGCATTCC AGAATTGCTC
AAAATCAATG TGGAGCTGAA CAACCTGGAT TCGGCCAACA TTTATATTAA GGCTAAAAAA
GAGGAAGTGA AGGACCTGAT CCAGCAATGT GCCGGGCTTT GGTTCGAAAC CAATCCCAAC
GACTTCTCTG CCGTTGCGGG CGACGAGGCG CGGATCAATA TCAGCGTCGT GAAGCGCTCC
GATTACCCTG TAAAACTCGT CTCGCTGCAT TGGACAGGCA AAACGGCGGA CAGCGTGATG
AACCTCGCGC TGAATTCCAA TGAGATGAAT GCATTTCCAA AACGGGCTAA ACTCCCCGCT
AACCTACCCA CCAGCCAACC CTACTGGCTT GAAAAGTCTA TCGAACGCGG CATTTTCCAG
ATCGACAACC AGCAGGATAT CGGCTTCCCC GAAAACCGGC CCGACACGAA GACGCGCTAT
ACATTCGAGA TAGGCGGACA GAAATTTGTA TTTGAAAAAC CCTGGGTTTA CAAATTCGTT
GATCCTGCGG AAGGTGAGAT TTACCGACCG TTCGAAATAC GCCCGCTCGT AACGACCACC
ATTACCGAGC CGGTGTTTAT TTTCCCTTCG ATGGAGGCCA AAACGGTAAA TATCATCGTG
GAAGCGCAAC GCGGCAATGT GAAAGGTACT CTGAAACCGC AAATCCCCAC AGGCTGGAAA
GCCGTTCCGG AATCCGCGGA ATTTAATTTA ACCAATAAAT ACCAGCAGCA ATACTTCTCG
TTCATCATCA CGCCACCGGC TGGTAATCAG GAAGCTGCGA TCAAAGCGGT GGCTGTTGTA
GATGGTCAGC AGTATGACAA ATCGGTTAAA ACCATCGCCT ACCAGCACAT CCCAAGTCAG
ACGCTCTTCC CCGAATCGTC GGCCAAACTG GCGAAGATTG ACGTACAAAC CACTGCACGT
AACATCGGCT ACATTGCCGG CGCGGGTGAT GATGTGCCCA CGGCACTCCG CCAAATGGAC
TGCCAGGTGA CGATGCTCAA CGAAGCAGGC CTATCAAAAG ACCTGAACGT GTACGACGCG
ATCGTGGTGG GTGTGCGTGC CTACAACACA GAGGCCTACC TGAACAACTA TCAGGCAAAA
CTGATGGATT ATGTGAAAAA CGGCGGTACG ATGGTCGTGC AGTACACCAT TCCCGGCGGA
CAAAAAGTGA AGGAAATCGG CCCGTACCCG ATCCAGCTGG GGCGTGAGCG GGTAACGGAA
GAGGACGCTG AAATGCATTT TCTGCAACCT GAAAACCCGG TTTTGAATTA CCCGAACAAA
ATCACGCAGA AGGATTTTGA AGGCTGGGTA CAAGAGCGCG GACTGTATTT TGCCCAGGAT
TGGGATAAAA AGAACTACGT CGCGCTGTTT TCGGCCCACG ATAAGGACGA GCCGGCCCGG
GAAGGCAGCA CATTGTACGC GCAGTACGGC AAAGGACATT ACATTTACAC CGGCCTCTCA
TTCTTCCGCG AGCTCCCCGC AGGCGTCACC GGCGCATACC GGCTGTTTGC GAATATGATT
TCGGTCGGCG GAGCGAAGTA A
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| Protein sequence | MHRFFTFALV LFATRLFAQT PALSSSEIFQ NIKKLNVLGS VLYIAAHPDD ENTLMLSYLS
KDQLVRTGYL SLTRGDGGQN LIGAEQGYNI GVIRTQELLA ARRIDGAQQF FSRAYDFGFS
KTRDETLHFW DREKVLGDVV WMIRKFQPDV IITRFPPDPR AGHGHHQTSA YLAEEGFGLA
ADPKAYPDQL KFVKTWQTRR LVWNTFTPGF TNKAPSEEKN PFISIEIGGY NPVLGKSYTE
IAALSRSQHR SQGFGSAPHR GDRIDYFLHK VGTPAEKGLF DGVDLSWKRL KGGEKVQALI
TAAIKNYSVN KPSASIPELL KINVELNNLD SANIYIKAKK EEVKDLIQQC AGLWFETNPN
DFSAVAGDEA RINISVVKRS DYPVKLVSLH WTGKTADSVM NLALNSNEMN AFPKRAKLPA
NLPTSQPYWL EKSIERGIFQ IDNQQDIGFP ENRPDTKTRY TFEIGGQKFV FEKPWVYKFV
DPAEGEIYRP FEIRPLVTTT ITEPVFIFPS MEAKTVNIIV EAQRGNVKGT LKPQIPTGWK
AVPESAEFNL TNKYQQQYFS FIITPPAGNQ EAAIKAVAVV DGQQYDKSVK TIAYQHIPSQ
TLFPESSAKL AKIDVQTTAR NIGYIAGAGD DVPTALRQMD CQVTMLNEAG LSKDLNVYDA
IVVGVRAYNT EAYLNNYQAK LMDYVKNGGT MVVQYTIPGG QKVKEIGPYP IQLGRERVTE
EDAEMHFLQP ENPVLNYPNK ITQKDFEGWV QERGLYFAQD WDKKNYVALF SAHDKDEPAR
EGSTLYAQYG KGHYIYTGLS FFRELPAGVT GAYRLFANMI SVGGAK
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