| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5773 |
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| Symbol | |
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| ID | 8229389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6933525 |
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| End bp | 6934649 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644933618 |
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| Product | oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_003090126 |
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| Protein GI | 255039505 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATTTAT ACATCCATAT CCCTTTTTGC AAACAGGCTT GCCATTACTG CGATTTCCAT
TTCAGCACCA ATACCACCCA AAAACGGGCA ATGGCAGAGG CGATTGCGCG GGAGATCGTG
CTGCGGAAGT CCTATTTGCC GGACGGGGAT ATGGAAACGA TTTACTTCGG CGGCGGCACG
CCCTCTATGC TCGACGAAGC GGAGCTGCAT TTGCTGCTTG ACACGGTACA CCGGCATTTC
AGGGTAGCGC CTGGCGCGGA AATCACACTG GAAGCGAATC CCGACGACCT GAACGCTGCC
AGTCTTTCAA TGTTTGCCAG GGCGGGAATT AACCGCCTGA GCATCGGCAT CCAGTCGTTT
CACGAGCCGC ATTTGCGCTT TATGAACCGC GCGCATACCG CTTTGGAAGC CAAACAATGC
GTGAAAATTG CGCAGAATGC AGGGATCGAC AACATCTCGA TAGACCTTAT TTACGCCATT
CCTTCTGAAA ATCATGACAT TCTCCACGCC GATCTGGCCC AGGCATTTGC ATTGAATGTG
CCCCACATTT CGGCATATTG TCTCACGATC GAGCCGCAAA CGGCATTTGG TAGTTGGCTG
AAAAAGAAGA AGATCAAGCC GATTGAGGAA GAATATGCGG CGCAGCAATT TGAAATGCTG
GTAGGTTCTC TCTGTGGCGA AGGATATGAG CAATATGAGA TCTCTAATTT CGCGAGAAAC
GGCCGTTACA GCCGCCATAA CAGCTCTTAC TGGAAGCAAC ACCCTTACCT GGGCGTAGGC
CCAAGCGCGC ATTCGTACAA TGGCACCACA CGTGAGTTTA ATGTTTCACA CAATGCCAAA
TACCTCGATG CGCTGCAAAA AGGCATCATT CCAGCCACTG TGGAAACGCT CACGGGCGCC
GATAATACCA ATGAATATCT GCTCACCGGC CTGCGCACGA TATGGGGTGT AGATTTGCAA
AAACTGCACG AATTATCAAA CGGCGCATTC GCAGCGCAAC ACCGGCGGCA ACTGGACGGA
ATGATCCGGA AAGGCTGGGT AAGGGAAGAT TCTGGTACAT TGCGGCTCAC GGAAGCCGGC
AAACTCTTCG CCGACCGCAT TTCGAGCGAT CTTTTTATAG ATTAA
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| Protein sequence | MHLYIHIPFC KQACHYCDFH FSTNTTQKRA MAEAIAREIV LRKSYLPDGD METIYFGGGT
PSMLDEAELH LLLDTVHRHF RVAPGAEITL EANPDDLNAA SLSMFARAGI NRLSIGIQSF
HEPHLRFMNR AHTALEAKQC VKIAQNAGID NISIDLIYAI PSENHDILHA DLAQAFALNV
PHISAYCLTI EPQTAFGSWL KKKKIKPIEE EYAAQQFEML VGSLCGEGYE QYEISNFARN
GRYSRHNSSY WKQHPYLGVG PSAHSYNGTT REFNVSHNAK YLDALQKGII PATVETLTGA
DNTNEYLLTG LRTIWGVDLQ KLHELSNGAF AAQHRRQLDG MIRKGWVRED SGTLRLTEAG
KLFADRISSD LFID
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