Gene Dfer_5766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5766 
Symbol 
ID8229382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6927897 
End bp6928277 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content49% 
IMG OID644933611 
ProductPilT protein domain protein 
Protein accessionYP_003090119 
Protein GI255039498 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.300152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTGC TCGATACGAA TATCCTCATT GATTATCTGA GGGGAAAGCA GGCTGCCATC 
GAATTTATTG ATTCTGCCAA TAAGCGGCGC TTTGCCGTGA ATACGGTTGT TGTTCTTGAA
CTTTATAATG GATGCCTGAA CCGCGCGGAG CTGACCAAAA TCCGGCGCTT GCTCAATGGC
TTCATGCATT TCGAATTGAA CGAAGCCATT GCACAAGCGG CCACGCGCAT CGGCCATAGC
TATGCATTGT CGCATTCGGT GAGCGCCCCG GACGCGTTGA TTGCGGCTAC CGCATTGGTT
TATAATCTCG AACTGCGTAC GGCGAACCTC AAAGATTTCA GGATGATTCC AGGCCTGAAA
TTGTCCAACG CATTGCAATA A
 
Protein sequence
MLLLDTNILI DYLRGKQAAI EFIDSANKRR FAVNTVVVLE LYNGCLNRAE LTKIRRLLNG 
FMHFELNEAI AQAATRIGHS YALSHSVSAP DALIAATALV YNLELRTANL KDFRMIPGLK
LSNALQ