| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5746 |
|---|
| Symbol | |
|---|
| ID | 8229362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 6901272 |
|---|
| End bp | 6901859 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644933591 |
|---|
| Product | protein of unknown function DUF162 |
|---|
| Protein accession | YP_003090099 |
|---|
| Protein GI | 255039478 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1556] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.021165 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCAC GAGATAAAAT TTTAGGCCAA ATCAGACAGA ATAAGCCGGA GGAAGTAGCA
TTGCCCGCGG TAACGACTTT CGCCAGCGAC TTTGAGAATA CCGAAGACAA ATTTCGCGAA
ATGCTGTCGG CGATTTACAC GGAAGTAATC GTGGTGAAAA ACCTCGAAGA GCTTGCGGCG
AAGGCGGAAG AACTCTACAC AGGAATCGCG AACCGCGCTA CTACCATCCC TGCATTGAGT
GGCTGGGCGG ATTTCAGCCT GAACGTCTCC GACCCACATG AGCTGGAAAC GGTGGAAATA
GCCATCGTGC AGGCGGAATT CGGGGTGGCG GAGAATGGGG CGGTCTGGGT TTCGGACCAA
TACCTGCCGC ATCGCGTGCT GCCGTTTATT ACCCAAAACC TCGCGTTCGT GATCCCGCGT
AACGCGCTCG TGAACAATAT GCATGAGGCA TATATGCGCT TGCAGGACAC GCTCGGCTGG
GGATGTTTCA TTGCAGGTCC GTCCAAAACT GCGGATATTG AGCAATCGCT CGTCATCGGC
GCGCACGGTG CACGCAGCAT GGTAATCTTC CTGCTCGAAA ATGAGTAA
|
|---|
| Protein sequence | MSSRDKILGQ IRQNKPEEVA LPAVTTFASD FENTEDKFRE MLSAIYTEVI VVKNLEELAA
KAEELYTGIA NRATTIPALS GWADFSLNVS DPHELETVEI AIVQAEFGVA ENGAVWVSDQ
YLPHRVLPFI TQNLAFVIPR NALVNNMHEA YMRLQDTLGW GCFIAGPSKT ADIEQSLVIG
AHGARSMVIF LLENE
|
|---|
| |