Gene Dfer_5714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5714 
Symbol 
ID8229330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6866995 
End bp6868242 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content55% 
IMG OID644933559 
Productputative acetyl xylan esterase 
Protein accessionYP_003090067 
Protein GI255039446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.785673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGGA TATTGTTTCT TGTAGTCACC TGGTGTCTCG TTGTTTTTCC AAAACTTTCA 
CATGCCCAGG ATGTGCAGCG ACTGCCCGAT CCGCTTCTTT TTAATAATGG TAAAAAGGTA
AAATCTGCGA AAGACTGGGA GCGCAGGCGG CAGGAAATCC GCGAAACGAT GACCCGGGAA
ATGTACGGAG CCGCACCGCA GCAGCCGAAA AACATGCGGT TCGAGGTTTT TGATCTTGAC
AAAAATGCGC TGGGCGGTAA AGCCACGCGT AAGCAAGTGA CGATCCATAT TACCGAAAAA
GGGAGGCAAG CGAAGTTCGA TCTGCTGATT TACATTCCAA ATCAAGCCAA ACAGCCTGTG
CCGGCTATTA TCGGCCTCAA TTTCATCGGT AACCAGGCCA TTCACCCCGA TCCGGGGATT
AAGCTCACCA CTGCCTGGGT GGAGAACAGC CGGATGTTCC CGTGCGGGGC CGACGGCAGA
GCTACCGATG CTTGCCGGGG TGTAAATGCC TCGCAATGGG CTGTGGACAG CATTCTCGCA
CGCGGGTATG CGCTCGTGAC GCTGTACCGT GAGGAGGTCG CTTCCGACCG GAAGGCACAG
GCATTTCAAA CGGGCATTCA CCCGCTCTAC CCCGAATTGC AACAGCGGGA GGATAATTTC
GGGACGATTG CTGCCTGGGC ATGGGCGCTC AGCCGCGGGC TGGATTACCT CGAAACGGAC
AGGGATATTG ATGCGAAACG AGTAGCCGTG TTCGGTTTTT CGCGGTTGGG CAAGGCTGCG
CTCTGGGCCG GTGCAACCGA CCGCCGTTTT GCTGCCGTGC TGAGCAATGA GTCGGGGGCG
GGTGGCGGAA AGCAGTTCCG CCGTGGTGTG GGTGAGGACA TCAACCGCCT TTGCACGGCA
TTCCCGCACT GGTTCGCCAG GAATTTTGCG CATTATAGAG GAAAAGATTC CGAACTGCCG
TTCGATCAGC ATTTCGTCCT TTCGCTCATT GCTCCGCGAC CCGTATACCT TGCAACCGCC
GAAGACGATA AGAATTCCGA TCCGCAGGGT GAGTTTGCCA CCGCGCGGGC TGCGGATGCT
GTGTACCGTT TTCTCGGGAC GAACGGTTTT CCGGACGGGG CGTTTCCGCC GTTGAATCAG
CCCCTGATGG GCCAAATCGG CTTTCATATC CGGCCGGGAG GGCATGATGT TAAAATGTTC
GACTGGATAC AGATTTTAAA TTTCTCTGAT TTACATTTGC AAAAATAG
 
Protein sequence
MMRILFLVVT WCLVVFPKLS HAQDVQRLPD PLLFNNGKKV KSAKDWERRR QEIRETMTRE 
MYGAAPQQPK NMRFEVFDLD KNALGGKATR KQVTIHITEK GRQAKFDLLI YIPNQAKQPV
PAIIGLNFIG NQAIHPDPGI KLTTAWVENS RMFPCGADGR ATDACRGVNA SQWAVDSILA
RGYALVTLYR EEVASDRKAQ AFQTGIHPLY PELQQREDNF GTIAAWAWAL SRGLDYLETD
RDIDAKRVAV FGFSRLGKAA LWAGATDRRF AAVLSNESGA GGGKQFRRGV GEDINRLCTA
FPHWFARNFA HYRGKDSELP FDQHFVLSLI APRPVYLATA EDDKNSDPQG EFATARAADA
VYRFLGTNGF PDGAFPPLNQ PLMGQIGFHI RPGGHDVKMF DWIQILNFSD LHLQK