Gene Dfer_5678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5678 
Symbol 
ID8229294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6825518 
End bp6826540 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content54% 
IMG OID644933525 
Producthypothetical protein 
Protein accessionYP_003090033 
Protein GI255039412 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.836755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.814223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCACTCA CCGCCGTGGC CCTGGCCGGA ACCGGAAGCG CTTTTGCACA GAAGGTGGAC 
CTCGTCCGTA ATGACAAGGA CAAAAAAGTG GAGGTGAAAA TCGACGGGAA GCCATTTACG
GCATACTATT ATCCCGGCGA ACAGAAGCTG AAAAAGGCCG TACTTTACCC CGTAATTACC
CCGAAAGGAA CAGTAATTAC ACGCGGCTGG CCGCTCGACC CGCGTGCCGG AGAGCGCGTA
GACCACCCGC ACCACGTGGG CATCTGGCTC AACTACGAGG ATGTGAACGG TAACGACTAC
TGGAACAATT CCGACGCCGT GAACCACGAA AAACGCGCCT ACGGAACCAT CATCCACACC
GGCATTACCT CCGTAAAAAG CGGTAAAGAC AAAGGCGAGC TAACCGTAAC CGCCGACTGG
GTGGACAAAA ACGGCACGTT GACGTTGAAG GAAGTAACCA AATACACTTT CAGCGGAAAA
GGCGACAGCC GCATCATCGA CCGGGCTACG ACGCTCACCG CCGTGCTGCC CGAGGTGAAT
ATGCCTGACG TGAAGGACGG TATGTACGCG ATCCGTGTCG GACGTGAGCT CGAACTGCCA
TCCACAAAGC CGGAAATTTT CACCGACGCC AACGGTATCG CGACCAAAGT GCCCGTGATG
AACAACGAAG GCGTAACCGG AAACTACCGC AACAGCAATG GCGTAGAAGG CGAGGCAGTA
TGGGGTAAGC GTGCGATCTG GTGTAACCTC ACCGGCAAGA TCAAGGACGA GAACATCAGC
GTAGCGATGA TCGACCATCC GAAAAATGTG GGTTATCCGG CCTACTGGCA TGCACGCGGC
TACGGATTGT TTGCCGTAAA CCCGCTGGGC ATGAAAGCGC TGAGCGATGG CAAGGAAACG
CTCAATTTCA AATTAAAAAA AGGAGAATCG ACTACTTTCC GTTACCGCAT GGTAATTGCT
TCGGAGCATT TGAAAGATGC TACGCTGAAT GACTTGGCGG CAGCTTATGC TAAAACAGAA
TAG
 
Protein sequence
MALTAVALAG TGSAFAQKVD LVRNDKDKKV EVKIDGKPFT AYYYPGEQKL KKAVLYPVIT 
PKGTVITRGW PLDPRAGERV DHPHHVGIWL NYEDVNGNDY WNNSDAVNHE KRAYGTIIHT
GITSVKSGKD KGELTVTADW VDKNGTLTLK EVTKYTFSGK GDSRIIDRAT TLTAVLPEVN
MPDVKDGMYA IRVGRELELP STKPEIFTDA NGIATKVPVM NNEGVTGNYR NSNGVEGEAV
WGKRAIWCNL TGKIKDENIS VAMIDHPKNV GYPAYWHARG YGLFAVNPLG MKALSDGKET
LNFKLKKGES TTFRYRMVIA SEHLKDATLN DLAAAYAKTE