Gene Dfer_5652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5652 
Symbol 
ID8229268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6788641 
End bp6789912 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content54% 
IMG OID644933499 
ProductN-acylglucosamine 2-epimerase 
Protein accessionYP_003090007 
Protein GI255039386 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2942] N-acyl-D-glucosamine 2-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTAG ATCAATTGAA AAGTTACCGC GAGGAAATCC GCCAGCATCT GACTTCGGAG 
CTGCTTCCAT TCTGGGAAAA CCGGGCTGTG GACCGGGAAA ACGGCGGCTT TATAACGCAT
TTCGACAACG CAGGCAACGA TTCGGGCGAG GACGAAAAGT CGCTCATCGC GCAAACACGC
ACGGTGTACA CCTTCTCCTC CGCACACCGC GCGGGCTATG GCGAAGGCCG GTATGCCGAC
ATTGCCCGGC ACGGTGTCGA TTTTCTGATC AACAAGATGT GGGACAATGA ATATGGCGGG
TTTTACTGGC TCATGGACCG CAAGGGCAAT GTCAACATCG ACGAAAAAAT CGTGTACGGC
CACAGCTTCG CGATTTACAG CCTTGCGGAA TATACGCTCG CTACCGGAGA CCCCCGCGGT
TTGGAATATG CGGAAAAGGT TTTTGACCTG TTACAAAAAC ATGGCGCAGA CACCTACTAC
GGCGGCTATT TCGAGATGTT CCACCGCAAC TGGGACCTCA AAGGCCCCGG CGCGGCGGGA
GGCGACCGCA AGACGCTCGA CGCTCATATG CACCTCATGG AAGCATTCAC GACGCTCTAC
GAAGCCTCGG GCAAGCAGGT TCACCGCCGC AAGCTGGTTG AGATAATCCG TTTGCTCATT
AATAAAATCA TGCATCCGCA ATACCGGACC GGCATTCCGC AGTTCTGGGA AGATTGGTCG
GTGGCGCCGC AGATCAAATT TGACATTATC TGGGGCTGGG ACCGCTTTAC CGAGGACGGT
GTAAAGAGCT CGGCGGAGGA TAATACCAGC TACGGCCACA ACGTAGAATT TGCGTGGCTG
CTCATGCACG CGCTCGACAT TGCCGGCATT CCGTACGACG AATACCACGA CCAGCTCAAA
GCTTCCTACG ACCACGCGGT CGAGTATGGC ATCGATTGGG AGTTTGGCGG TGTGTATGTG
GAGGGCTCTC ACGCCGGCGA AGTGTACGAT CGCGAGAAGG AGTTCTGGCA GCAAGCGGAA
GTCATTATCG GTATGCTCGA CGCCTACCGG GTGTATGGCG ATGAGAAGTA TTTGAAAGCC
TACGACGCCA CCCATCGTTT TGTTTTTGAT AAAATGATCC ACCATTCGGT AGGCGAATGG
CTCCCGCTCC TCACACGCCA GGGCGAGCCG ATATGGAAGC ATATGAGCCA TTCGTGGAAG
GTCAATTACC ATTCGGTGCG CTCGATGGTG CAGGGAATTG TCCGTTTGAA CAAACTGATT
GGAAATAAGT AG
 
Protein sequence
MNVDQLKSYR EEIRQHLTSE LLPFWENRAV DRENGGFITH FDNAGNDSGE DEKSLIAQTR 
TVYTFSSAHR AGYGEGRYAD IARHGVDFLI NKMWDNEYGG FYWLMDRKGN VNIDEKIVYG
HSFAIYSLAE YTLATGDPRG LEYAEKVFDL LQKHGADTYY GGYFEMFHRN WDLKGPGAAG
GDRKTLDAHM HLMEAFTTLY EASGKQVHRR KLVEIIRLLI NKIMHPQYRT GIPQFWEDWS
VAPQIKFDII WGWDRFTEDG VKSSAEDNTS YGHNVEFAWL LMHALDIAGI PYDEYHDQLK
ASYDHAVEYG IDWEFGGVYV EGSHAGEVYD REKEFWQQAE VIIGMLDAYR VYGDEKYLKA
YDATHRFVFD KMIHHSVGEW LPLLTRQGEP IWKHMSHSWK VNYHSVRSMV QGIVRLNKLI
GNK