Gene Dfer_5638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5638 
Symbol 
ID8229254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6775793 
End bp6776698 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content53% 
IMG OID644933485 
ProductABC transporter related 
Protein accessionYP_003089993 
Protein GI255039372 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.321953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCGG TTGTTGTCAA AAATCTGGTC AAAACATACG GCAAGGAGCA AACCGTGGCC 
GTGGACGATG TGTCGTTTTC CGTAAACCAG GGCGAGCTGT TCGGGCTGAT AGGGCCGGAC
GGGGCCGGCA AGACGAGCAT TTTCCGGATG CTGACCACGC TATTGCTGCC GGATGGCGGC
TCTGCGAGCG TGGATGGCCG TGATATCGTG GAGGATTTCA GGCAGATACG CAGTTCAGTG
GGTTATATGC CAGGCAAATT TTCGCTCTAC CAGGACCTTA CCATTGAGGA AAACCTGCAA
TTCTTTGCCA CCGTTTTCGG CACTACGATC GAGGAGAACT ACCATTTGAT CAAAGACATT
TACGTCCAGA TCGAGCCTTT CAAAAACCGG CGTGCGGGAA AGCTGTCTGG TGGGATGAAG
CAGAAGCTCG CATTATGCTG CGCATTGATA CATAAACCCA CGACACTGTT TCTGGATGAA
CCCACGACGG GCGTTGACCC GGTATCGCGG AAGGAGTTCT GGGAAATGCT CAGGCGGCTG
AGAGAACAGC AGATTACCAT CCTCGTTTCG ACGCCTTACA TGGACGAGGC TTCGCTTTGC
GACCGCATTG CGCTGATCCA GGGTGGCAAA ATCCTGTCGA TCGACACGCC GCAAAACATC
GTGAATGCCT ATCCCGACCG GTTGCTGGCC ATTAAAGCAA ATGAAATGTA CCAATTGCTG
AAAGTGCTGG AAGGCCATCC TGATACTATC AATAGCTACG CATTCGGCGA GTACGCACAC
GCTACGTTTC GCGACGCGGA TACGCACGCA TTGCAGGCAT ACCTGGGCGC GCAAGGCCTC
ACGGGCGTGG AAGTGATAGA CGCGGAGGTC ACGATCGAGG ATTCATTTAT CAAATTATTA
CATTAA
 
Protein sequence
MEAVVVKNLV KTYGKEQTVA VDDVSFSVNQ GELFGLIGPD GAGKTSIFRM LTTLLLPDGG 
SASVDGRDIV EDFRQIRSSV GYMPGKFSLY QDLTIEENLQ FFATVFGTTI EENYHLIKDI
YVQIEPFKNR RAGKLSGGMK QKLALCCALI HKPTTLFLDE PTTGVDPVSR KEFWEMLRRL
REQQITILVS TPYMDEASLC DRIALIQGGK ILSIDTPQNI VNAYPDRLLA IKANEMYQLL
KVLEGHPDTI NSYAFGEYAH ATFRDADTHA LQAYLGAQGL TGVEVIDAEV TIEDSFIKLL
H