| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5636 |
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| Symbol | |
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| ID | 8229252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6773575 |
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| End bp | 6774840 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644933483 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003089991 |
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| Protein GI | 255039370 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.513783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.540164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATTG CAGGTGGTTT GGTGCTCTGG GTGAGCCACT TGAAAGCGCA GGATGCCCCG
CTGAATATCC GGGAGGCGTA CCGGCTGGCC CGGAACAATT ACCCGATGAT CCGCCAGCAG
GGGTTGATCG ACAAAACGCG TGACTATTCG GTCAGCAATG CTTCGAAGGG CTTCTTACCG
CAGCTGACGG TGCAGGGCCA GGCTACTTAC CAGTCGGCCG TGACGGAGTT CGGGCTGCCC
GTCGCGATTC CGGGCGTGGA ATTTCCGCGG ATCAGTAAGG ACCAGTATAA GGTGTTCGGC
GAAGTGAACC AGACGATTTA TGACGGCGGT AATGTCCGTA CGCAGGTGCG CTCACACGAG
GCTGGTGCGC TGGTGGAGGC CCGGAAGCTG GAAGTTGAAC TCTACAAGCT GAACGACCGG
GTGAACCAGC TGTTTTTTGG CATACTCATG CTGGACGAGC AGCTGAAACA GAACGAGTTG
CTGAAAAAGG ACATTCACCT CGGCATACGC AAAGTGCAGG CATTGATCGA CAATGGGACG
GCATTTAAAA GCAACGCCAA CACATTGAAA GCGGAACTAT TGAAAGCCGA CCAGCGCGCC
ATCGACCTGA ATGCGAGCCG GAAGGCTTAC CTGGAAATGC TCGGGCTGCT GACCGGACAG
CCGCTGGGAA ATTCGGCGGT ACTCGAAAAG CCGGTGGAAC TCGCCGGAAC TGGTGAGGTC
AACCGCCCCG AGCTGGAACT GTACGATGCG CAGAACCGGA GCCTGGATAT TCAGTCGCAG
CTGATTGACG TGCGCAACCG TCCGAAGCTT AACTTCTTCT TTCAGGGCGG TTACGGCCGG
CCGGCGTTGA ACATCCTCAG CAATGGGTTT GATCCCTATT ATATTACCGG CGTACGTTTG
AACTGGTCAT TATCAGGCCT ATATACAATC AAGAAAGACC GGGAGCTGGT ACGCAACAAC
CGGGACGCCA TTCTGCTCCA AAAAGAGACA TTCCTTTTCA ACACCCATCT TAATGCAAAG
CAGTACCACG CGGAGCTCGA CCGGTTTCGC CAGCTGCTCA CCACCGACGA CGAGCTCATT
ACCCTCCGCG AAAGCATTAA AACAACAGCG GCTGCGCAGC TTGAAAACGG CGTGATCAAC
ACCAATGATT TCCTGCGCGA GGTGAATGCG GAAGACCAGG CGCGGCAGAA CAAAATCTTG
CACGGCATTC AGCTGCTGAT GGCGCAGTAC AATCTGGACA ATACCCTGGG AACAACAATC
GAATAA
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| Protein sequence | MIIAGGLVLW VSHLKAQDAP LNIREAYRLA RNNYPMIRQQ GLIDKTRDYS VSNASKGFLP
QLTVQGQATY QSAVTEFGLP VAIPGVEFPR ISKDQYKVFG EVNQTIYDGG NVRTQVRSHE
AGALVEARKL EVELYKLNDR VNQLFFGILM LDEQLKQNEL LKKDIHLGIR KVQALIDNGT
AFKSNANTLK AELLKADQRA IDLNASRKAY LEMLGLLTGQ PLGNSAVLEK PVELAGTGEV
NRPELELYDA QNRSLDIQSQ LIDVRNRPKL NFFFQGGYGR PALNILSNGF DPYYITGVRL
NWSLSGLYTI KKDRELVRNN RDAILLQKET FLFNTHLNAK QYHAELDRFR QLLTTDDELI
TLRESIKTTA AAQLENGVIN TNDFLREVNA EDQARQNKIL HGIQLLMAQY NLDNTLGTTI
E
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