Gene Dfer_5635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5635 
Symbol 
ID8229251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand+ 
Start bp6772863 
End bp6773474 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content53% 
IMG OID644933482 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003089990 
Protein GI255039369 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0445849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.712508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAG CGAAGAAAGA GGCACTGGAC CTGAGTACCG AAGAGAAGAT CAAGGAAGCG 
GCGGGCGTGG TATTTACCAA GAAAGGTTAC GGCAATGCGC GTACGAGGGA TATCGCCGAG 
GAGGCGGGCA TTAACCTGGC GCTGCTCAAC TACTATTTCC GGAGCAAGGA AAAGCTTTTC 
CAGATCGTGA TGGCGGAGCG GATCGATAAG CTCTTCGGCG TACTGGTGCC GATCCTGAAT 
GACGCCTCGA CGACGCTGGA AGAGAAGCTT GAAAAGATCA CGGAGAACTA CATTAATATG 
CTCCTCGAAC ATCCCGACCT GCCGATTTTC GTGCTGAGCG AGATCCGCAA CAATCCCGAT 
CAGCTTTCGA ACCGCTTGCA AGCCCAAAAG CTGCTGCGGG AATCGGTTTT CGTGAAGCAG 
CTGAGCGAAC GCAAAACCGA TATTAATCCG ATCCATTTCT TGATGAACCT TCTGGGGATG 
AACCTGTTCC CATTTGTAGC GAAGCCGGTT TTACAGCCGA TCCTCGGTAG CGAAGAAAAC 
TACCGCCAGC TGATGGAGCA GCGGAAAAAG CTGATCCCGG CGTGGATGAA GCTGATGCTC 
GACCATTCCT GA
 
Protein sequence
MAKAKKEALD LSTEEKIKEA AGVVFTKKGY GNARTRDIAE EAGINLALLN YYFRSKEKLF 
QIVMAERIDK LFGVLVPILN DASTTLEEKL EKITENYINM LLEHPDLPIF VLSEIRNNPD 
QLSNRLQAQK LLRESVFVKQ LSERKTDINP IHFLMNLLGM NLFPFVAKPV LQPILGSEEN 
YRQLMEQRKK LIPAWMKLML DHS