| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5615 |
|---|
| Symbol | |
|---|
| ID | 8229231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 6751885 |
|---|
| End bp | 6753174 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644933462 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003089970 |
|---|
| Protein GI | 255039349 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATAT CTACGAAATC GAAATACATT GCCTATATCG CCATCCTGCA CCTGGTGCTG
ATCCTGCTGG TTTACAAGCT GCTTTTTGAG AATAAGGCAT TGTTCATCGC GTCGGAGGTG
TTTTTGTTGC TGTCCGCGGG CGCTTCCATC GTTCTTTACA ACAATTTTAT GCAACCTATC
CAATTTGTGA AGTCCGGGAT CGAAGCCATT AAGGACAAAG ACTTTTCCAT CAAATTCGTC
CCGACGGGCA AAGGAGAGGT GGATATTCTC ATCGAGGTTT ATAACCTGAT GATCGACCAG
CTGCGCGAGG AGCGGATCAG GCTCAACGAG CAGCATTTCT TTTTGGAAAA ACTCATCGAA
GCCTCACCTA TTTCGATCAT TATCCTCGAC TACGACGACC GCATCGAATC GCTCAACAGC
AAAGGCAAAA GCCAGTTTGA GCAGGGCGGG AGGGAGCTGG CCGGCAAAAA GCTGGACGAA
ACGGACCTGG CCCTGCTGAG CGAGCTGGCG GGCATTCTCG ATGGTGAATC GAGGCTCATT
AAAACGAACG GGATCGCTAC TTTCAAAGCG CAGCGTTCGC ATTTTATGGA CCGTGGCTTC
CGCCGGTCGT TCCTCATGAT CGAGGAGCTG ACGAACGAGA TCCTCGAATC GGAAAAGAAT
GCTTATGGCA AGGTTATCCG GATGATGGCG CATGAAGTGA ACAATACCCT CGGCGCCACC
GATTCCATTT TGCAGACGAC CACGCATTTG CTTCCTGATA CCGATTACCG GGATATCAAA
GACGCATTGA GTGTAGTCTC AGAACGCAAC CAGCGCCTCA CGCGCTTCAT GCGCAATTTC
GCGGACGTGG TGCGCCTGCC AGCTCCCGTG CCCGAGCGGA CGGACATGGG CGCATTGACG
CGCGACGTAG CCGTTTTTAT GCAAAATGCG GCCTCGGTAC GGAACGTGCT GGTGCAAAGC
GATTTGGATG AAAACGTATT TTGGAATGTA GACAAAGGCC AGATGGAGCA GGTTTTGATC
AACGTGATCA AGAATGCGGT GGAAGCTTGC GAGAGCGGGC AGGAAGTACG CATTTATATC
GCCTCCGACC GCCTGGTGAT CCGGAATAAC GGCAAGCCGA TCGATCCGGA GGTGAGTACA
AAGCTATTCA ACCCATTTTT CAGCACCAAA CGCGACGGCC AGGGAATCGG CCTCACACTG
ACGCGCGAAA TACTCGGTAA TCACGGGTTT GGCTTTGCAT TAGAAACCCG CGCCGACGGC
TGGACGGAGT TTCGCATCGA AACGTCGTAG
|
|---|
| Protein sequence | MRISTKSKYI AYIAILHLVL ILLVYKLLFE NKALFIASEV FLLLSAGASI VLYNNFMQPI
QFVKSGIEAI KDKDFSIKFV PTGKGEVDIL IEVYNLMIDQ LREERIRLNE QHFFLEKLIE
ASPISIIILD YDDRIESLNS KGKSQFEQGG RELAGKKLDE TDLALLSELA GILDGESRLI
KTNGIATFKA QRSHFMDRGF RRSFLMIEEL TNEILESEKN AYGKVIRMMA HEVNNTLGAT
DSILQTTTHL LPDTDYRDIK DALSVVSERN QRLTRFMRNF ADVVRLPAPV PERTDMGALT
RDVAVFMQNA ASVRNVLVQS DLDENVFWNV DKGQMEQVLI NVIKNAVEAC ESGQEVRIYI
ASDRLVIRNN GKPIDPEVST KLFNPFFSTK RDGQGIGLTL TREILGNHGF GFALETRADG
WTEFRIETS
|
|---|
| |