| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5609 |
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| Symbol | |
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| ID | 8229225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6744121 |
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| End bp | 6745365 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644933456 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003089964 |
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| Protein GI | 255039343 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGGG AAATTGCTCC GGAATATGTC CAACAAACGA GGAACCGCCG ATGGCTCGCT
GTCGCGGCGG TGGTGCTGGG GCTAGCTGCC CTGTTTTATT TTTTCAAAAA GTCACTTTCC
AGCACGCTCG AAAGTTCACG TGTAAGAACC GGGACGGTCG AGACCGGCGA TGTCGAGAAC
ACGCTGACGG CCTCGGGAGA GATCATTCCG GCTTACGAGC AGATCTTCGC CAGCCCGATC
CGCGCGAGCA TCAAACGCAT TTTGCTTACG CCCGGCACAC GGGTGCAGCC CGGACAGGCG
ATTGTGGAGC TGGACAAGTC GTTGACAGAA ATCGAGTTTG GCCGCTATGA GGACCAGCTC
GAACTGAAAA AGAACGGCGT TGACCAGCTG CGTATGAAGC TGAATAAGGA TTTGTACGAT
GCCGAGATTA ATGACAGGAT CAAGTCTTTG AATATCAATA AACTGAAAGC GGATTTTGAG
GATGCCAAAC GGTTGCAGAA AGTCGGTGGC GGCACCGTTG AGGACATTAC GCGGGCGGAG
AATGCACTGA AAATCGCGGA ACTGGAAAAG AAACAGCTGG AAAACGACTT GAAATACAAC
CGGGAGTCGA TGGGTGCCAG CCTGCGCGAA ACGGAACTCG GCGTGCAGAT CGAGGGCAAA
AACTTGCAGG AATTGCAGCA TAAGCTCAAA ATGGCGGACA TCATCGCCGA TCGCCCGGGC
GTGCTGACGT GGGTGAACGA AAACATCGGA TCATCGGTGA ACGAGGGTGA AATGCTTGCC
AAAGTGGCGG ATCTGGGGAG TTTCCGGGTG GAAGGCAGTT GTTCGGATGT GTATGCGGAC
CAGGTGAAGG CTGGCCTCGG CGCGATCATC CGGATCAACG AATCGCATTT GCGCGGCACG
ATTACGCAGG TGAAACCGGC TGTGAAAGAC GGCGTAATCG GGTTCACGAT CCAGCTCGAT
AATGCACGCA ACGAATCGCT GAGGCCCAAT ATGAAGGTGG AAGTGTATGT AATAACCACC
AAAAGTGCCC GGACCCTGCG CGTGGCCAAT GGCCCGACGT TTACCGGCAA GCGGAAACAG
TACGTGTACG TCGTTGAAAA AGGCATGGCG CGCCGCCGCG AAATCGAAAC GGGCCTTTCC
AATTTTGATT ATGTAGAGAT CAAAAGCGGC TTGAAACCGG GCGAGAAGGT CATTTTGACC
AATATGAATG AGTACGAACA CCTCGAAGAG CTGACCATTC AATGA
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| Protein sequence | MDREIAPEYV QQTRNRRWLA VAAVVLGLAA LFYFFKKSLS STLESSRVRT GTVETGDVEN
TLTASGEIIP AYEQIFASPI RASIKRILLT PGTRVQPGQA IVELDKSLTE IEFGRYEDQL
ELKKNGVDQL RMKLNKDLYD AEINDRIKSL NINKLKADFE DAKRLQKVGG GTVEDITRAE
NALKIAELEK KQLENDLKYN RESMGASLRE TELGVQIEGK NLQELQHKLK MADIIADRPG
VLTWVNENIG SSVNEGEMLA KVADLGSFRV EGSCSDVYAD QVKAGLGAII RINESHLRGT
ITQVKPAVKD GVIGFTIQLD NARNESLRPN MKVEVYVITT KSARTLRVAN GPTFTGKRKQ
YVYVVEKGMA RRREIETGLS NFDYVEIKSG LKPGEKVILT NMNEYEHLEE LTIQ
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