| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5600 |
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| Symbol | |
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| ID | 8229215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6728490 |
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| End bp | 6729956 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644933446 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003089955 |
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| Protein GI | 255039334 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.635453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TTAAATATAT AGCACTTGCT CTGGGGTCGG CCATGCTGCT GCCGGCGTGC
CAGGATCAGT TGGATTTGCA GCCTGTATCT CAAACAGTGG TAGGGGAAAG CGGAAGCGGC
ACAGCCGGGT CGTCCATCAA AGATGCGGCC AGCGCCGAGG CTGCGCTCGC TGGTGCCTAC
GCCATTTTCA AAAACGGCTC CGCGGAATAT TATGTCATGG ACTATTTCAT CCTCGGTGAC
GGGCAGTCCG ACAACTCCTA CGCCGGTGCC GACAATGCGG CCTGGTTTGA AGTAGACGAA
TTCAGGGTGC TTTCCACGAA TGCGGTTGCG GCAAGGGACT GGCGCTATTT GTATAACCAC
GTGGCGAGTG CCAACTCGAT CATTGCCAAT GTGCCGAAGG TGACGGACGC ATCGCTCTCG
GCTACCCGCA AGGCGCAGAT CGTCGGTGAA GCTAAGTTCA TTCGTGCGCG GGCCTATTTC
GACCTTGTGC GGATTTACGG GGACGTGCCG CTGGTGGTGG ACGAGCTGCC TACCATTACA
TCTTCCAATG TGGAAGAGAT CTATGGCCAG CTCTACCCGG CCAGAAGCGC GGCCGAGGAG
GTTTATGCGC AGATTGTAAA AGACCTGGAC GAGGCAGCCC CTGCTGTGCC CAAAACAGGT
CCGAACAAAA TGACCGTCAC GCCCGGCGCC GTGCATACCC TGCTGGCGAA GGTATACGCA
ACCCGCAAGG ATTGGGCAAA AGTGAAGGAG AATGCCGACA AGGTGATTGC CCTGGGCTAC
ACGCTCATGC CGAATTTCGA AGATCTGTGG GACGGAAAGC ATGAAAACAG TGCAGAAGCC
ATTTTTGAAC TAAACTTTGA AGAATGGGCC ACTGGCGGAA ACTGGGGATC ATCCATGTTC
TATGGCACCG ACTGGAAGAA GTTTAACACC CCTTCCAACG ACCTTGTGAA GGCCTATGAC
GATGAAAAGG ACGTGGTGCG CAAGGCTTCC ACGATTTACA CAGCCAATGT GACGGGCAAA
TGGTCCGACC GTTACTGGCC ATTGAACAAC TTCCCGTTTG CCTATAAAAT GCGCAATACG
GACGCTTCGC AGAACATCAT CATGTACCGC CTGGCCGACG TGCTGCTGCT CAAAGCGGAA
GCATTGAACG AAACGGGCGA CCTGGCGGGT GCCCGCACGC TGGTAAACCA AGTGCGAACG
CGCGCCAAGC TGCCAGCCAC ACCGGCGGCC GATCAGGCGG CTATGCGCCT GGCCATCGAA
AAAGAGCGCC GTTTGGAGTT CGCATTCGAA GGGCAGCGGT GGCACGACCT CGTGCGCACG
GGAAGGGTAG TACCGGTAAT GGAAGCCGTG AAGGACGGCG CCGGCAACAG CCTGAATTAC
AAACTATCCG ATACGAAGCT GCTATGGCCG GTTCCGCAAG GTGAAATCGA TAAAAATGCG
AATCTGAACC AAAATAACGG TTATTAA
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| Protein sequence | MKKIKYIALA LGSAMLLPAC QDQLDLQPVS QTVVGESGSG TAGSSIKDAA SAEAALAGAY
AIFKNGSAEY YVMDYFILGD GQSDNSYAGA DNAAWFEVDE FRVLSTNAVA ARDWRYLYNH
VASANSIIAN VPKVTDASLS ATRKAQIVGE AKFIRARAYF DLVRIYGDVP LVVDELPTIT
SSNVEEIYGQ LYPARSAAEE VYAQIVKDLD EAAPAVPKTG PNKMTVTPGA VHTLLAKVYA
TRKDWAKVKE NADKVIALGY TLMPNFEDLW DGKHENSAEA IFELNFEEWA TGGNWGSSMF
YGTDWKKFNT PSNDLVKAYD DEKDVVRKAS TIYTANVTGK WSDRYWPLNN FPFAYKMRNT
DASQNIIMYR LADVLLLKAE ALNETGDLAG ARTLVNQVRT RAKLPATPAA DQAAMRLAIE
KERRLEFAFE GQRWHDLVRT GRVVPVMEAV KDGAGNSLNY KLSDTKLLWP VPQGEIDKNA
NLNQNNGY
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