| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5566 |
|---|
| Symbol | |
|---|
| ID | 8229181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 6691158 |
|---|
| End bp | 6692369 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644933412 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003089921 |
|---|
| Protein GI | 255039300 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.430665 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGG AAGCACCCCA TTTACACACC ATTTCCCATG ACAATATCCC GCTTTGCCGG
GTAGGCGGCA GCGTCTTAAA CGCCGGCCCA AAAGCGCTTC CGGAGCAGCT ATCTGAATTT
TTTACCGGGA TTTTCAGCAC CTCCGAATGG CCGGCGAGGT GGTACTGCGG CTACTGGTCC
GATTTCCATG GCTGGCTTTA CATCGTTTCC GATCTTTTCA TCTGGGCGGC CTACTTTGTG
ATCCCCACTT TCCTGGTCCG GTTTATATTA AAACGGAAAG ACTTTCCATT CCCGAAAACC
ATCTGGCTCT TCGTGGCCTT CATCTTTTTC TGCGGCGCCA CGCATTTAAT CGACGCGCTG
ACTTTCTGGG TGCCGGTGTA CCGTTTCAGC TCATTGGTAC GGTTCGCGAC GGCCATTGTA
TCGCTCACCA CGGTTTATTA TCTGTTCAAA ATATTCCCGA ACGTCCTCCT GCTCAGGTCC
GTGGCCGATC TGCAACGGGA GATCGACGAG CGGACGACGA TCGAAGAGAA GATGGCGCAG
AAGAACAGCC AGCTGCAAAG CTTCACTCAC ATCCTCTCGC ACAACCTGCG GAACCACGCG
AGCAATATTG CGCTCCTCAC CGATTTCGTG GACGAATCGA CGCTCTCGAA GGATAATGAA
GAGCTTTTCC AGAAGATTAA AACCGTATCC AAACACCTCA ATACCACCCT CGACGACCTG
TCGCAGGTGA TCAAAATCCG CGACAACCAG CTGGAAGGCG AACAGCTGGA CATCCGGGAA
GTGACCGAAC GGGTGTTGGG CGTGCTCGAC GAAAGCCTGC ACACGAGCCA GGCCGAGGTA
CGGATGGATT TCAGCGAGCG GGAAATCGTG TTTCCGCACA TTTACCTGGA AAGCATTCTG
ATGAACCTGA TCTCGAACGG TATAAAATAC AAAAAAGATG GTGAACCTCC TTTGATCACA
TTGCGTTTCT ACCGTAACGA AAATGGCCTT AAAGTACTGG AATACAGCGA CGAAGGAAAG
GGCATCGACC TTTCGCTTCA TTCGGACAAG ATCTTTGGTT TGTATAAAAC TTTCCATAAA
CACCGGGATG CTCACGGAGT TGGACTATTT TTGATAAAAA ATCAGATTGA AGCCCAGGGC
GGGAACATTG AGGTATTCAG TAAGGTCGAC GCGGGTATTA CTTTTAAAAT TACATTCAAC
GAAAATGCTT GA
|
|---|
| Protein sequence | MNPEAPHLHT ISHDNIPLCR VGGSVLNAGP KALPEQLSEF FTGIFSTSEW PARWYCGYWS
DFHGWLYIVS DLFIWAAYFV IPTFLVRFIL KRKDFPFPKT IWLFVAFIFF CGATHLIDAL
TFWVPVYRFS SLVRFATAIV SLTTVYYLFK IFPNVLLLRS VADLQREIDE RTTIEEKMAQ
KNSQLQSFTH ILSHNLRNHA SNIALLTDFV DESTLSKDNE ELFQKIKTVS KHLNTTLDDL
SQVIKIRDNQ LEGEQLDIRE VTERVLGVLD ESLHTSQAEV RMDFSEREIV FPHIYLESIL
MNLISNGIKY KKDGEPPLIT LRFYRNENGL KVLEYSDEGK GIDLSLHSDK IFGLYKTFHK
HRDAHGVGLF LIKNQIEAQG GNIEVFSKVD AGITFKITFN ENA
|
|---|
| |