Gene Dfer_5565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5565 
Symbol 
ID8229180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6690752 
End bp6691165 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content48% 
IMG OID644933411 
Productresponse regulator receiver protein 
Protein accessionYP_003089920 
Protein GI255039299 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.373706 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAAA TCCTCTGCGT AGTCGACGAC GACAAAATCT TTACCTACCT CTTGAAACGC 
ATCATTGAAA AGGCCAAAAT TGCACGGGAA ATCATATTTT TCGAAAACGG CCGTGATGCG
CTCGATTATC TGGCAAATCA CCGCGACGAC GCATTGAAAC TTCCTCAACT CATCCTGCTC
GACATCAATA TGCCCATTCT GGACGGCTGG CAGTTTTTGA GTGAATATGG AAAACTGGAA
CCGACGGTAC CCCAACCGAT ATCGATCTGC ATGATGAGCT CTTCCTCCGA CCTCGAAGAT
TACGACCGTG CGATGGGCTC CGGGCATGTG ATGGACTACC TTCAAAAACC GGTTCAGATG
CCTTCTCTGA AAGAAGTTAC CGAACGCGTA TTGTCATTCG TTGCCCCGAA ATAG
 
Protein sequence
MLEILCVVDD DKIFTYLLKR IIEKAKIARE IIFFENGRDA LDYLANHRDD ALKLPQLILL 
DINMPILDGW QFLSEYGKLE PTVPQPISIC MMSSSSDLED YDRAMGSGHV MDYLQKPVQM
PSLKEVTERV LSFVAPK