| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5542 |
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| Symbol | |
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| ID | 8229157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6671223 |
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| End bp | 6671861 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644933388 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003089897 |
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| Protein GI | 255039276 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.448293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTGC AGCCAGGTAA AATTTTGCTG GTCGACGACC ACCGGATTTT CAACGACGGG
CTGAAACGCC TGATCGACGA AGAACCGTCG CTCACCGTTT GCGGCCAGGT TTACGACCCA
AAAGATATCT TCACGGCAAT CGAAAAATGC AAACCTGACC TGCTGCTGCT GGACATCAAT
CTGCTGGGCC AGAATGGCAT AGACCTGGGC CGGAAGGTGC TGGCGCAAAA CCAGGGAATC
AGGGTGATCG TGCTCACCAT GTACGACCAG CTGAAACTCC TCGACGAAGC CCGCCGGGCG
GGAATGCACG GCTATCTTCT GAAAGACTCC ACTACCGCCG TGCTGCTGAA GGGCATTAAT
ACCGTCCTTT CGGGAGGAAC GTATTTCGAA AGCCTGACTA AAAAAGTGAA CGGTGGCGCG
GGCGATTTCG GCGATACTTT TACCCAAAAA CTCAACCTGA CTTTCCGCGA GATCGAAATC
ATCGGGTTCA TTAAAAAGGG ATATACCAAT GAGCAAATTT CCGCCGCGCT GAACCTGAGT
TTTTTTACTG TTAAAACGCA CCGGAAAAAC ATCCATTTCA AACTAGGCAT CAACAATGTC
GCCGAACTGA TCGAATTCGC GATTCAAAAC GGCATTTAA
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| Protein sequence | MTLQPGKILL VDDHRIFNDG LKRLIDEEPS LTVCGQVYDP KDIFTAIEKC KPDLLLLDIN
LLGQNGIDLG RKVLAQNQGI RVIVLTMYDQ LKLLDEARRA GMHGYLLKDS TTAVLLKGIN
TVLSGGTYFE SLTKKVNGGA GDFGDTFTQK LNLTFREIEI IGFIKKGYTN EQISAALNLS
FFTVKTHRKN IHFKLGINNV AELIEFAIQN GI
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