| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5523 |
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| Symbol | |
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| ID | 8229138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6651440 |
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| End bp | 6654229 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644933370 |
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| Product | beta-lactamase |
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| Protein accession | YP_003089879 |
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| Protein GI | 255039258 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.904088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.44531 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACC TGCTCATTGC GGTGCTCCTG GCTTTTTGCC AGGTAGTGTC CGCACAGATC
AAGATCGAAC TGCCGGAAAC GGTTGCCGAC AAATCATTTG TCACGAGTTT GATTAAAGCC
GCCGAGGCAC GGCAGAAAGC TTACACGGAC AGCCTTTTCA AAGTGAAAGG CGATGGCGGC
ACGCAGAATC CGCCTAACGA TCTGCCAAGG TGTGATCGTG GACCGGTCCC GAATGATATT
TTCAATGTAA CCACGACCAG CGCGATAGTG CTTTGGGATG GTGAGAATGT TTTCGGCTGG
GACTATTCAA TTTACAAGGG CAATGAGCGT GTCGCGTTCG GATCGGTAAA GCCAACGAGC
AACCGGGAGC CGATCAACTA CGCGGGCCTT GCACCAGGCG AGTACACGCT GAGCATGCAG
GGCAACACCT GCAAGAGCGA CGTTTACAGT AAATCGTTTA TCATTCCCAA ACCTACCAGT
GATGGCGGCG GAGATACGGG CGGGCCTGGT CCGCCGCCGG TTGATAAAGA TCGCAGGTTT
GAGTTTTTGA TAGGTACCAC CGGTGGCGGA TTCGATCCGA ATGCGAAACA CGGAATCGCG
GAGGGTCGAT GGGAAGATGG TAAGTATCTG GAAGGATGGA CCGACCGCAT TGAAGCCTTC
AAATATTCGT GGGGATATGG TGTTTCTGGC GTCTCGCTTT GGATTCATTG GGATGTTTAT
GAACCGGCAA AAGGTCGGTA CGAAACCGCG GCATTGCAAC GGGCAATCGC CTATTGCCGT
GAGCGCAAGC TCGGGCTGGC AGTGGTATTC CTGGCGAAAC GGAAGAAGAA CGACGGTTTT
CTCCGCGAGG ATCAAATGGT CACATTTTCC AATGGTACGA TCCTGGAAGA AGGGGTAAAA
GGCCAGCCCA ATGTAGGCGT GTATCCTGGA TACGGCTGCG ATGAATGTAA CTCGGCGATG
GCCGGCGCCA TCAAGGATAT TGCTCGTCAG CTGAAAACCT ACGACCGATC GCTTTACATG
GCGCTCGGCG GCGGGCATAC GGGCGAGCTT GTTAATCACA TCGACGTTCA GAATGGAGTT
TGGTATACCG GCGATTTCTC GGCTGATAAC CTTTCCCGGT TTCAGAATTG GGTAAAGAAG
CGCGGACTCG CGCAGCCTGG CCGGCCGCCG ATGGTGGAAG GCCCTGGCAT CGACTGGCCG
CATCCGAATT TCAATGATCC GCTGGGACTG GAATTTGGGA GGTTTCAGAC GCTCAACATT
CAGAAACATT ACAAATCCTT CACGGACGCG GTAAAGTCCG AGTACAATCT CCCATGCATT
TACCTTTACG CCGCAGCGGC CAACCGTCAG CTTCAAAGCA CGGCCAATGC CAACCTGGCA
TTCATTGCCG GATCTGGTGA TGGCACATAC GGTAGCGATG GCGACGGCGT AGAAGATCAC
GTCGCAAAGT TCCGGGTGCA CTCAGTTAAC CAAGGTACAT TCCCGGGCGG TTACAGCATT
GTCGAGTTTG ATCCGGATGA CATGAGCCAC TACCGGTACC AGGTGAAATG GTCAACCCCG
CCTTACTGTG AGGCGAATCC GGACTATGCA ATCTGGGAGC GCAGCATGGA TATGCTCTTT
TCTCGCGGGC TCTGGGCTCC TCATACAGCC ATGGCGTTTT GTGTGGATGA GATCAGAGGA
ATGGAGCCGT TCCTGAAAAG GCTGTGGGGT AAATGGATCG GCAAGGTCTA CGTGCGAGCA
AAACTGCCGG TTGTTGAGGT TAACATCACA GACAAATACC GCCGCGGTGA AGACCTGCTG
CAAGGGATCA ACGTTTACGA CAACTTCACC AAATACGCTG ACGGCGGGCT CTATTTCTGG
GGAGGCGTTT CGCCCTTCGT GGATGGCGCG CAGCCAGGCG TAGACAACAG CAAGTTCACC
GGCTACCTGG ATGCCAACCT ACCGGCCTAC GGAGGCAACG TACTGGTGGA CATAAAAACT
CCATCGGGCA CGGCTTACAG CTACACAAAA GGGCAGTACG GCCGCAACGA TCAGCTCTCG
GTGATGTCCC ATTCTAAGCT GGCCACTGGA GCAACGATCG CGGTGCTGAT CAGTGAGGGT
AGGCTAAGTT TGGATACGAA GGTGGGCGAC GTAATTCGAT CATGGAATAA GCCGGGCCTC
CGTGACATCA CGCTGCGGCA GATCATCGGT CACACGTCCG GCATTCCGGA TGATCAGACC
AACGAAGGCG CGAAAACCTT GGAGCAATAC GTCGACTGGC TCGCTGGCCG ACCGGGCTTT
AAAACGCCTG GCGCGCAGTA CAGCTATTCA ACGGTTTCCT ACCAGGTAGC CGCACGCATG
GCCGAAATCG TTACCGGACA GCCTTGGAAG GAGATCTTCA ATTCTCGCAT CCGAGACAAG
AGCGGGATGG GCAATGCGGA ATACAACCCG CGCGGCCCTG GTCCAGTGTA TGGCAGCCCG
GAAAACCCGC TGGCCGGCTA CGGTTTGAAG TGCTCGCAAA ACGAATGGTC GAACTTCGCT
GGCATGCTCC GCGATGGAGG GGTATTCAAT GGAACGCGGG TGCTCAGTAA TCAGGCTTTG
CAGATCCTGA AAACGAAGCT GACCGGCCTG AGTAATTGGG GCTGCGGTGT AATCCTGAAC
GGCGCGCAGC TGATCAGCGA ATCGGCGCTC GGGTGGTACA CGGCGATACT TCCTGACAAA
TGGTCCCTGG TGGTTGCCAC GCAATCACCC TATAATACTA CGATCGGGCC CAACAACGGA
TTCCGGGAGC TTGTCAGTCA GTCCCTATGA
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| Protein sequence | MKNLLIAVLL AFCQVVSAQI KIELPETVAD KSFVTSLIKA AEARQKAYTD SLFKVKGDGG
TQNPPNDLPR CDRGPVPNDI FNVTTTSAIV LWDGENVFGW DYSIYKGNER VAFGSVKPTS
NREPINYAGL APGEYTLSMQ GNTCKSDVYS KSFIIPKPTS DGGGDTGGPG PPPVDKDRRF
EFLIGTTGGG FDPNAKHGIA EGRWEDGKYL EGWTDRIEAF KYSWGYGVSG VSLWIHWDVY
EPAKGRYETA ALQRAIAYCR ERKLGLAVVF LAKRKKNDGF LREDQMVTFS NGTILEEGVK
GQPNVGVYPG YGCDECNSAM AGAIKDIARQ LKTYDRSLYM ALGGGHTGEL VNHIDVQNGV
WYTGDFSADN LSRFQNWVKK RGLAQPGRPP MVEGPGIDWP HPNFNDPLGL EFGRFQTLNI
QKHYKSFTDA VKSEYNLPCI YLYAAAANRQ LQSTANANLA FIAGSGDGTY GSDGDGVEDH
VAKFRVHSVN QGTFPGGYSI VEFDPDDMSH YRYQVKWSTP PYCEANPDYA IWERSMDMLF
SRGLWAPHTA MAFCVDEIRG MEPFLKRLWG KWIGKVYVRA KLPVVEVNIT DKYRRGEDLL
QGINVYDNFT KYADGGLYFW GGVSPFVDGA QPGVDNSKFT GYLDANLPAY GGNVLVDIKT
PSGTAYSYTK GQYGRNDQLS VMSHSKLATG ATIAVLISEG RLSLDTKVGD VIRSWNKPGL
RDITLRQIIG HTSGIPDDQT NEGAKTLEQY VDWLAGRPGF KTPGAQYSYS TVSYQVAARM
AEIVTGQPWK EIFNSRIRDK SGMGNAEYNP RGPGPVYGSP ENPLAGYGLK CSQNEWSNFA
GMLRDGGVFN GTRVLSNQAL QILKTKLTGL SNWGCGVILN GAQLISESAL GWYTAILPDK
WSLVVATQSP YNTTIGPNNG FRELVSQSL
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