| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5440 |
|---|
| Symbol | |
|---|
| ID | 8229051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 6564124 |
|---|
| End bp | 6565116 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644933284 |
|---|
| Product | Alpha/beta hydrolase fold-3 domain protein |
|---|
| Protein accession | YP_003089797 |
|---|
| Protein GI | 255039176 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.165063 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGA ACAACAAAGA ACCAATGGTG CAGGACTATG CCACAGACCC AGGCTTGTCC
CGCGAGGTGA GGGAATTTTT GAAGATGGTG AACAATTCCG GAGCACCCGC CCTGGAAACG
CTGTCGCTAT CCGACGCCCA GGCCGGCCTT GCCCATGCGC AGGCATCGGT AAAAGTGGAT
GTTTCGGGGA TAGAAATCGA CCTGAAAACC ATTATCAGCG ACGGCTACAC GGTAGAGTTG
CACATTGTAA GGCCGGAAGG GGCTAAGGGC ATATTGCCGG TATTCATGTT CATCCACGGC
GGAGGCTGGA TTCTCGGCGA CTTCCCGACG CACCACCGGC TGGTACACGA CATTGTGGTG
GAGTCGGGCA TGGCGGCAGT GTTCGTGAAT TATTCGAGGA CGTCCGATGC GCGCTACCCG
CAGGCGATCA ACGAGATTTA TGCAGCCACC AAATGGGTAG CGGCCAACGG GCAACAGATT
CATGTCGACG GAAGCCGCAT GGCGATCGTC GGCAACAGTG TAGGGGGGAA CATGAGCACC
GTTACCTGCC TCATGGCGAA GGAAAAAGGC GGGCCTGAAA TCAAGCTGCA AGTGCTGATG
TGGCCCATCG TCGATTCCGA TTTCGAAACC GAATCCTACC GCAGGTTCGG CAAGGATCGC
TTCCTGAGTA CATCGCTCAT GAAATGGATG TACGACCTAT ACATTAAGGA CCCGGCGGAA
CGGAAGGCGA TTTATGCCTC GCCGCTGCAA GCTACTTTGG AACAGTTGCG GGGGCTGCCG
CCTGCGCTTA TTCAAACAGC AGAAAACGAT GTTCTCCGCG ATGAAGGAGA AGCGTATGGT
CGCAAGCTCG ACGAAGCCGG TGTGCCCGTT ACCACCGTTC GCTACAACGG CATGATCCAC
GATTTCGGGC TGCTGAATGG CCTCGCTACG CTCCCCGCCG TGCGTTCGCA CATCGTGCAA
ATCGGCGCCG AGCTGAAAAA GTACCTCGGC TAA
|
|---|
| Protein sequence | MEKNNKEPMV QDYATDPGLS REVREFLKMV NNSGAPALET LSLSDAQAGL AHAQASVKVD
VSGIEIDLKT IISDGYTVEL HIVRPEGAKG ILPVFMFIHG GGWILGDFPT HHRLVHDIVV
ESGMAAVFVN YSRTSDARYP QAINEIYAAT KWVAANGQQI HVDGSRMAIV GNSVGGNMST
VTCLMAKEKG GPEIKLQVLM WPIVDSDFET ESYRRFGKDR FLSTSLMKWM YDLYIKDPAE
RKAIYASPLQ ATLEQLRGLP PALIQTAEND VLRDEGEAYG RKLDEAGVPV TTVRYNGMIH
DFGLLNGLAT LPAVRSHIVQ IGAELKKYLG
|
|---|
| |