Gene Dfer_5415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5415 
Symbol 
ID8229026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6537124 
End bp6538029 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content59% 
IMG OID644933260 
ProductNmrA family protein 
Protein accessionYP_003089773 
Protein GI255039152 
COG category[R] General function prediction only 
COG ID[COG2910] Putative NADH-flavin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.958636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0224555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGGAC AACAACACCT TACACACCAA ACTATCGCAG TCGCCGGGGC GACCGGGCAG 
CTGGGGACAT TGATCATCAA AGAACTCCTC ACGCGGCATG CGCATGTGAA GGCGCTCGTG
CGCAGGGATA CGCCTCTCGC CAAAACGGAA CCGCTCAAAA AGGCCGGGGC GACGGTCATT
CCGGTCGATT ATCAGAATAC CGTTACGCTT ACAGAGGCGC TGCGTGACGT CCAGTGCGTC
GTTTCCGCGC TCTCGGGACT CCGGGAAGTG ATCGTCGGCA CGCAGTCCGA CCTGTTGAAA
GCGGCCCTGA ATGCCGGCGT GCCGCGTTTC ATCCCGTCCG ACTATTGCAT TGATTTCACC
AAACTTCCCA ACGGCTCAAA CCGTAACCTC GACCTGCGGC GCGAGTTCGC GGGCATCGTC
GGCAACACGC CGATCCACAC TACGTCCATT CTCAACGGCA TGTTCACCGA TTTGCTCAAA
GATCAGGCGC CATTAATTCT CCCCAAGCTC AACCGCGTGA TTTACTGGGG CGATGCCGAC
CAGCCGATGG ATTTCACGAC GATCGCCAAC ACAGCCGCAT TCACAGCCGC CGCCGCGCTC
GACCCGCAGG CACCGCGTTT TTTGCGCATT GCCGGTGAAG TGGCGACGAT CCGGGATTTG
CAGCGCGCCG CCAACCAGGC ATATCGCAAG GAATTCGGCC TGTGGCGAAT CGGAGGGCTT
GGCTTCCTGG CGACGATGAT CCGGATTATG CGCACGATCG CCCCCGGCCG TGACGAGGTG
TTCCCGCCCT GGCAGGGTAT GCAGTATCTG CACAATATGC TCAGCGGTTT ACCGAAATTG
GAACCGCTGG ATAATGCGCA CTATCCGGAA ATTAAATGGA CAAAGGTCCG CGATGTGCTG
AGCTGA
 
Protein sequence
MTGQQHLTHQ TIAVAGATGQ LGTLIIKELL TRHAHVKALV RRDTPLAKTE PLKKAGATVI 
PVDYQNTVTL TEALRDVQCV VSALSGLREV IVGTQSDLLK AALNAGVPRF IPSDYCIDFT
KLPNGSNRNL DLRREFAGIV GNTPIHTTSI LNGMFTDLLK DQAPLILPKL NRVIYWGDAD
QPMDFTTIAN TAAFTAAAAL DPQAPRFLRI AGEVATIRDL QRAANQAYRK EFGLWRIGGL
GFLATMIRIM RTIAPGRDEV FPPWQGMQYL HNMLSGLPKL EPLDNAHYPE IKWTKVRDVL
S