Gene Dfer_5399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5399 
Symbol 
ID8229010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6520422 
End bp6521183 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content56% 
IMG OID644933244 
Producthypothetical protein 
Protein accessionYP_003089757 
Protein GI255039136 
COG category[S] Function unknown 
COG ID[COG4544] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCC CGCTCCTGAA AAACGGCATG TTTAGCAGGC TGCAACAAGA TATTCTTGCT 
TTGCAGGGAT TTCGGGCGCC TGTTGGGGGA AGGAAAATCG ACTTCGGGCT TGGAGCAATG
GATTCGGCGT TTCCGAACGG TGCTTTTCCT ATCGGCGCGG TGCACGAATG GGTGAGCACC
GACCCTGAAA GCGCGGCGGC AACAACCGGT TTCATGGCCG GATTATTGGG CAAGCTGATG
GGAGAACACG GTATATGCCT GTGGATCGGA ATCCGCCCGA TCGTGTTCGC AACGGCGCTC
AAAGCATTTG GCATCGAGCC GCATCGCGTG ATTTTTATTG ACCTCGCCCG GGAAAAAGAT
GTGATCTGGG CTGTGGAAGA GGCACTGAAA TGTGAGTCGC TGGCGGCGGT GGTCGGGGAA
ATTCGGGAAA TCACATTTAC GGAATCGCGC CGGCTTCAAC TGGCGGTGGA GCAGAGCCGG
GTTACGGGCT TTCTGCATCG GATCAATCCG CGTGCGGTGA GTACGCTTGC CTGCGTGTCG
CGCTGGCAGG TAACGCCACT GGCAAGTCAT ATTGAAGCAG GGATGCCGGG TGTGGGACAT
CCCTGCTGGC GAGTGGAATT GCAAAAAATC AGGAATGGCG AACCAGGCCA ATGGGATATG
CAATGGGTAG CAGGGCGATT TGAATACCTC GAAAAGGAAA CCGAAAGCCG TGCCGCGGCA
GTTACCACAG GCGCTTCGCC ATACATTGCG CAAAGGGCTT AG
 
Protein sequence
MSRPLLKNGM FSRLQQDILA LQGFRAPVGG RKIDFGLGAM DSAFPNGAFP IGAVHEWVST 
DPESAAATTG FMAGLLGKLM GEHGICLWIG IRPIVFATAL KAFGIEPHRV IFIDLAREKD
VIWAVEEALK CESLAAVVGE IREITFTESR RLQLAVEQSR VTGFLHRINP RAVSTLACVS
RWQVTPLASH IEAGMPGVGH PCWRVELQKI RNGEPGQWDM QWVAGRFEYL EKETESRAAA
VTTGASPYIA QRA