| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5369 |
|---|
| Symbol | |
|---|
| ID | 8228980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 6491907 |
|---|
| End bp | 6493382 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644933214 |
|---|
| Product | cobyric acid synthase |
|---|
| Protein accession | YP_003089727 |
|---|
| Protein GI | 255039106 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1492] Cobyric acid synthase |
|---|
| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCTA AAAAATTACG TCCGATCATG TTTGTCGGCA CGGGCTCGGA TGTGGGCAAA
AGCGTGATTG CGGCCGGTTT CTGCCGGATT TTCAGGCAGG ACGGCTACCA GCCTGCGCCT
TTCAAGGCCC AGAACATGTC GCTCAACAGC TTCGTCACGC CCGATGGCCT GGAACTGGGC
CGCGCACAGG CGGTACAAGC CGAAGCAGCG CAGGTAGCGT GCGAATCGGA TATGAACCCG
GTGCTGCTGA AACCGACCAG CGACAAATCT TCGCAGGTGG TATTGAATGG AAAACCGGTG
GGTAACCAAA CGGCCTACGA ATATTTCATG GGCAACGACC GCCGCGAGCT GTTTGCGGCC
GTGAAGGATG CCTTCGACCG CCTTGCAGCC AAATATTCGC CGATCGTAAT GGAGGGCGCG
GGGAGTATTT CCGAACTCAA CCTGAAACAC CGGGATATTA CTAATCTAAG AATGGCGGCC
CACGCAGGCG CGGCTACCTA CCTGATCGCC GATATCGACA AAGGCGGGGT GTTTGGCAGC
GTGTATGGCA CCATCGCATT GCTCACGCCC GAGGAGCGGG CGTGTATGAA GGGTATCATT
ATCAATAAAT TCCGTGGCGA CGGCCGGTTG TTTGAAGACG GCCGGCAAAT GCTGGAAGAA
CTCACCGGTT TGCCGGTGGT CGGTGTTTTG CCGTATTTCC GGGATATCCA TATTGAACAG
GAAGATTCGG TGTCGTTGGA GCTCAAATAC CGCTCTGCGG TGGAAGGAAA AGTGAATGTA
GCTGTGATCC TGCTCAACCG GCTATCCAAT TTTACAGATT TTGACCGGCT GGAAAAGGAT
ATGCGCGTGA ATTTGTATTA TACCAATAAC CCCTCCGAAA TAGCAAAGGC GTCGATCGTG
ATCGTGCCGG GAAGTAAGAA TACCATCGGG GATATGCTGG CGATTAAGAA TAATGGCGTG
GCGAAGGCCA TTTGCGAGGC GCATAAGGCG GGAAATACCG TGATCGGGAT TTGCGGCGGT
TACCAAATGC TCGGCGAGCG GATCATGGAC CCGCACCATG TGGAAAGTGA AATTGAAGAA
TTGCCAGGCC TCGGACTCCT GCCGGTGGAA ACGATCCTGG AACGCGAAAA GACCACACTC
CAAAGCACTT TCCGTTTCAG GCAGGCGGAG CAGGTGTGCA CCGGCTATGA AATTCATATG
GGCAGAACAA CGGCATTCCA GCCCGGAGAG GCGGTTGTGA CGATGATGGA CGGGCGGCGG
GACGGCTACT TCCGCGACGA CCGTACCTGG GGCACCTACC TCCACGGCAT CCTCGACAAC
GACGTGGTGA TCGAGCAAAT GCTCGCGCCC TACACGCAGG AAAAAGCAGT GACGTACGAT
TACGCACAAT TTAAGGAACA ACAGTACGAT AAACTCGCTG CATTGCTCCG GGCGCACATC
GATATGGATT TGATTTACAA CAGCATAGCA GAATAA
|
|---|
| Protein sequence | MNAKKLRPIM FVGTGSDVGK SVIAAGFCRI FRQDGYQPAP FKAQNMSLNS FVTPDGLELG
RAQAVQAEAA QVACESDMNP VLLKPTSDKS SQVVLNGKPV GNQTAYEYFM GNDRRELFAA
VKDAFDRLAA KYSPIVMEGA GSISELNLKH RDITNLRMAA HAGAATYLIA DIDKGGVFGS
VYGTIALLTP EERACMKGII INKFRGDGRL FEDGRQMLEE LTGLPVVGVL PYFRDIHIEQ
EDSVSLELKY RSAVEGKVNV AVILLNRLSN FTDFDRLEKD MRVNLYYTNN PSEIAKASIV
IVPGSKNTIG DMLAIKNNGV AKAICEAHKA GNTVIGICGG YQMLGERIMD PHHVESEIEE
LPGLGLLPVE TILEREKTTL QSTFRFRQAE QVCTGYEIHM GRTTAFQPGE AVVTMMDGRR
DGYFRDDRTW GTYLHGILDN DVVIEQMLAP YTQEKAVTYD YAQFKEQQYD KLAALLRAHI
DMDLIYNSIA E
|
|---|
| |