| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5326 |
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| Symbol | |
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| ID | 8228937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6430593 |
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| End bp | 6431579 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644933171 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_003089684 |
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| Protein GI | 255039063 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000585614 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.154893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGTC CCATTACAGG TAAGGAAATG CTTTTAAGGC ATGAAGCGAG CAAAGTGGCG
TTCAGAAAGG AAGAGTTTTC GATCGTCAGC CATTATTATG AATGCGGAGA TTCCGGTGAG
CGGTTTACCG ACGATCGTCT GGACGAGTTG AGCATCGTGC AGGTGCACAA CCAGTACCGC
GAAAAGTACG GGATACCGTT TCCGGATGAA ATCAGGCGTA TCAGGGAGCG GTATGGGATC
TCGGCCAGCA AAATGTCCGA AATCCTGGGG CTAGGTGCAA ATTCGTATCG CTTGTATGAG
TCAGGAGAAG TACCGTCGGT CGCGATTGGC CGGCTAATCA TGTCGATCCG AAACCCTGAA
ACATTCATAC AGCAGGTATC CGCCAGCGCC TGCTTTCTGA CCGCAAAAGA AGTTGCCAAA
CTTACACTCG CGGCCGAAAA CCTGCGTGCA CAACCCGCCC AGGAGGCTGT TTTTCCATCA
AAACTCAACG GCTACCGCCA GCCTGATCTT TCCAAAATAG CTGGCATTAT CGCTTTCTTT
CAGGGATTTT TGAAGAGTCC GCTGTTTAAG ACAAAACTCA ATAAACTACT GTTTTATACG
GACTTCAACA CTTACAAACT AACCGGCTAT TCCACAACGG GACTGGAATA CCGGGCGATA
CAATTCGGCC CGGTGCCTTC GCAATTTCAG AAAATGTACG TCAATCTGTC TGAAACCGGG
CAAATCAGCA TAGACGAGCA GTATTTCGGA AATGGTGCTT ACGGCGACGA GATCAATGCA
AAAGTTGCGT TCGACCAAAC GCTGTTTTCG CCGGAAGAAC TTGATGTACT TGAACACGTG
GCAAATCGAT ATGCAAAACT ATCTACCGAC GATATCGTGA AACTCAGCCA TGAAGAAACG
GGCTGGATGG ACAATGCCGA TCAAAAAGCG CTCATCAATT ATCGGTATGC GTTCGAGCTC
CGCCAGGGGA TAAAGCCCAT TTCCTGA
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| Protein sequence | MKSPITGKEM LLRHEASKVA FRKEEFSIVS HYYECGDSGE RFTDDRLDEL SIVQVHNQYR
EKYGIPFPDE IRRIRERYGI SASKMSEILG LGANSYRLYE SGEVPSVAIG RLIMSIRNPE
TFIQQVSASA CFLTAKEVAK LTLAAENLRA QPAQEAVFPS KLNGYRQPDL SKIAGIIAFF
QGFLKSPLFK TKLNKLLFYT DFNTYKLTGY STTGLEYRAI QFGPVPSQFQ KMYVNLSETG
QISIDEQYFG NGAYGDEINA KVAFDQTLFS PEELDVLEHV ANRYAKLSTD DIVKLSHEET
GWMDNADQKA LINYRYAFEL RQGIKPIS
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