Gene Dfer_5261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5261 
Symbol 
ID8228872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6348092 
End bp6348730 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content52% 
IMG OID644933107 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003089620 
Protein GI255038999 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGG ATTCGCTGGC CAGCAAGGTG TATGTTGAAC TACGGAGAAA AATCTTGTCT 
AACCAGCTCG TGCCGGGCAT CCGGCTTAAA GAGGATGTCT GGGCCAAACG GATGGAGGTC
AACAGGATGG CCGTGAGGGA GGCGCTGACC AGGTTGCTGG GCGAAAATCT GATCGTTTTT
GGCGAGAAAG GTGGCTATTT TGTAAAGTCG CTGAGTGCTG CGGACATTAA GGAGATCAGG
GAGTTGCGCG AGGTGCTCGA ACTCGGCGCG CTACGGCTGA CTTTCCAAAA AAGGGACGAT
GTACTGATTA AGAAGCTGGA AGACATTTGC GACGATTTCA CTTCCATGGT GAGCGGCGGG
TATTTTGGCG GGGCTTGCGA GGCGGATGTC AAATTTCACG AGACGTTGAT CGACAGCGCG
AGCAACAAAA AGCTGATGGA TTTGTACCAA TTGAGCAATA TCCCCCTGTT TCACCACAAG
CTCGGACAGG CCCAGACACA CCTGAACGAC TACGAGCAAA CCGATTTCGA GCACCGGCAA
ATCGTGCAGG CCATGAAAGA AAATGACCTC AAGCTAGCCG AAGAAACGCT CATCAAGCAC
TTGATCAGGG GCGAAGTTTC CGTTCTGGAT TTGGAGTAA
 
Protein sequence
MKEDSLASKV YVELRRKILS NQLVPGIRLK EDVWAKRMEV NRMAVREALT RLLGENLIVF 
GEKGGYFVKS LSAADIKEIR ELREVLELGA LRLTFQKRDD VLIKKLEDIC DDFTSMVSGG
YFGGACEADV KFHETLIDSA SNKKLMDLYQ LSNIPLFHHK LGQAQTHLND YEQTDFEHRQ
IVQAMKENDL KLAEETLIKH LIRGEVSVLD LE