Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5261 |
Symbol | |
ID | 8228872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 6348092 |
End bp | 6348730 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644933107 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003089620 |
Protein GI | 255038999 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAGG ATTCGCTGGC CAGCAAGGTG TATGTTGAAC TACGGAGAAA AATCTTGTCT AACCAGCTCG TGCCGGGCAT CCGGCTTAAA GAGGATGTCT GGGCCAAACG GATGGAGGTC AACAGGATGG CCGTGAGGGA GGCGCTGACC AGGTTGCTGG GCGAAAATCT GATCGTTTTT GGCGAGAAAG GTGGCTATTT TGTAAAGTCG CTGAGTGCTG CGGACATTAA GGAGATCAGG GAGTTGCGCG AGGTGCTCGA ACTCGGCGCG CTACGGCTGA CTTTCCAAAA AAGGGACGAT GTACTGATTA AGAAGCTGGA AGACATTTGC GACGATTTCA CTTCCATGGT GAGCGGCGGG TATTTTGGCG GGGCTTGCGA GGCGGATGTC AAATTTCACG AGACGTTGAT CGACAGCGCG AGCAACAAAA AGCTGATGGA TTTGTACCAA TTGAGCAATA TCCCCCTGTT TCACCACAAG CTCGGACAGG CCCAGACACA CCTGAACGAC TACGAGCAAA CCGATTTCGA GCACCGGCAA ATCGTGCAGG CCATGAAAGA AAATGACCTC AAGCTAGCCG AAGAAACGCT CATCAAGCAC TTGATCAGGG GCGAAGTTTC CGTTCTGGAT TTGGAGTAA
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Protein sequence | MKEDSLASKV YVELRRKILS NQLVPGIRLK EDVWAKRMEV NRMAVREALT RLLGENLIVF GEKGGYFVKS LSAADIKEIR ELREVLELGA LRLTFQKRDD VLIKKLEDIC DDFTSMVSGG YFGGACEADV KFHETLIDSA SNKKLMDLYQ LSNIPLFHHK LGQAQTHLND YEQTDFEHRQ IVQAMKENDL KLAEETLIKH LIRGEVSVLD LE
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