Gene Dfer_5216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5216 
Symbol 
ID8228826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6284650 
End bp6286311 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content48% 
IMG OID644933065 
Producthypothetical protein 
Protein accessionYP_003089579 
Protein GI255038958 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGTGT TGGGACACGA ACCAGCCAAA GGTAAGAGAA AGAAAAGCAA CATGAATAAA 
AAAATTAGTG CGGGAATCTG CAACCCTTTT AAACTTTTCG GCGTCATCCA TATCGAAAGA
AATATATTTC AACTGACGTT CTTTGCCTTA CTGATTTTTT CGCCTTATCT GTTTGCACAG
AAAGCACCGG CTCAGCCGCA GTCTCCTCAA AGTGAGGATC TTGTGGAAAT CCTTAAATCG
GATGAGCTCG AAATCATCAA CCAACCGGGC GATGATTCCC GGCGTGTTAC CAACGGCGTT
TTCAAGCACA AGGGCGCACT TCTGTATAGC AACCTGGCCA TTCAGCATAT CAATTCCAAC
GTAATCGAAG CTTTTGGTAA TGTAAGAATC GTCCAGGGCG ATACAGTGAC GGTCACCGGG
GATACGCTGT ATTATTACGG AAACACCCGG CTGGCCATTG TAAGCGGAAA GAAAACCGTT
TTGAAAGACA CCAAAAAAAC GCTTACGACC CGTAAAATCG AGTACGACAT GGCCAATGGC
ATTGCCTATT ACAAGCAGCC CGGCCGGACC GTCGACGAGG AAAACGTGCT CACGAGCAAG
GAAGGTTTTT ACAACACAGC CACCAAGGAG TTTACCTATT ACCAGAATGT GAAGCTGGTG
AATAAAAAGT ACACCCTCAC AACGGACACG CTGCTTTATA ATTCGATCAA CAAATGGTCG
TACTTCAATG GGAAGACCAA GATCGTTAAC AAAGACGGCA CGGTGGTTGG CACGAAGGGG
CAATACAACA CGGAGTCTAC ACAGTCGTCA TTTCACACGC GCACGACGGT CGATAACGAA
ACGTATACAC TCACCGCAGA TTCACTGGTG GTCGATGGCA AAAGCAACGA CGGTAAAGGA
AAAGGTAATG TGGTGATTGT AGCCAAAAAA GACCGGACGG TCCTTAATGG CGACGAGGGA
TATTACTGGA AAACAAAGGG TTACTCCAAA ATATTCGGAC ATGCATTTGT TAGAAATGTC
GTATCGGAAG ATACTCTTTA CATCCGCGCC GACACGCTGC ATTCGTATGA AAATGCCCGT
GACAGCACGA GAAAGCTCAT CGGAGACCGT AACGTGTTCA TTTACAAGTC GGATTTCCAG
GGAAAATGTG ATTCGATCAC TTACGACACC GCCGATTCGA TCATCCGCTT CTTCCGCAAA
CCGATCCTCT GGAGCGACCA GCATTACCAG ATGGAAGCCG ATTCTATCAC CGCGTTCCTT
GTGAGCAACG AGATCAACCG GATGCTGCTC AAAGGGAAGT CTTTTGTGAT CACCGAGGAT
ACCCTGGTGA AGCAATTTAA CCAGGTGAAG GGCCGGACGA TCAATGCCTA TTTCCAGACG
GGCAATAAGT TAAAACAGGT CCTGGTGGAC GGCAACGGGG AAAGTGCTTA CTATGCAGTG
GACGATAAGC AGAAAAATAT CGGTTTGAAC AGGGTCGAAT GCGGGAGAAT GAACCTGCTT
TTCGAGGATA ACCGGGTGCA GCGGATTGCA TTCATCGGGA AACCGGATGG AAAGCTGATC
CCTCCATCCA AAATAAAGCC CGCCGAGCGA CAGCTCGATG GCTTCAATTG GCGCATTACA
GAGAAGCCGA CGAAGGAAAA GGCGACCTGG CAGGAAAAAT AG
 
Protein sequence
MMVLGHEPAK GKRKKSNMNK KISAGICNPF KLFGVIHIER NIFQLTFFAL LIFSPYLFAQ 
KAPAQPQSPQ SEDLVEILKS DELEIINQPG DDSRRVTNGV FKHKGALLYS NLAIQHINSN
VIEAFGNVRI VQGDTVTVTG DTLYYYGNTR LAIVSGKKTV LKDTKKTLTT RKIEYDMANG
IAYYKQPGRT VDEENVLTSK EGFYNTATKE FTYYQNVKLV NKKYTLTTDT LLYNSINKWS
YFNGKTKIVN KDGTVVGTKG QYNTESTQSS FHTRTTVDNE TYTLTADSLV VDGKSNDGKG
KGNVVIVAKK DRTVLNGDEG YYWKTKGYSK IFGHAFVRNV VSEDTLYIRA DTLHSYENAR
DSTRKLIGDR NVFIYKSDFQ GKCDSITYDT ADSIIRFFRK PILWSDQHYQ MEADSITAFL
VSNEINRMLL KGKSFVITED TLVKQFNQVK GRTINAYFQT GNKLKQVLVD GNGESAYYAV
DDKQKNIGLN RVECGRMNLL FEDNRVQRIA FIGKPDGKLI PPSKIKPAER QLDGFNWRIT
EKPTKEKATW QEK