Gene Dfer_5203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5203 
Symbol 
ID8228813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6274054 
End bp6274776 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content52% 
IMG OID644933052 
Productpantothenate kinase 
Protein accessionYP_003089566 
Protein GI255038945 
COG category[K] Transcription 
COG ID[COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor 
TIGRFAM ID[TIGR00671] pantothenate kinase, type III 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.812354 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTG TTGTGGATTC GGGGAACACC TTTTCGAAAA TCGGATGGTT CGAAGGGGAA 
AAACTTATAC GATATACGAC GCACCTGGAT TTCCCGGAAT TGATCCGCAA TATCCAAGCG
GAGCTTCCGG AATACCTCTT CTTTTCGTCG GTCGGACCTA CGCAGGAAGA GTTCCAGCAG
GCGCTCGGAG CATCGCTGCC GGTGATCGGA CTCACGCCCG ACACGCCATT GCCGATCGTT
AAGCATTACG ACACCCCGCA AACGCTTGGC GCCGACCGCA TTGCCGCCGC CGCGGGTGCC
AATTTCCTGT TCCCGGGTGA AGACCTCGTC GTGATCGATA TGGGCACCTG CATTACTTAC
GACGTGATCG ACCGCGACGC GACGTTTCAG GGCGGGTTAA TTTCTCCCGG CGTGCGGATG
CGATTCAACG CCATGCATAC GTTTACCAAA AGGCTCCCGC TATTCGAACC CGAAAAAGGC
CCGGAACTGA TCGGGAAAAG TACACGGCAA GCCATGCAAA GCGGCGTCAT GAATGGTACC
CTGGCCGAGA TCGAAGGAAT TATTGAACGT TACCGTCACA AATACCCAAC TTTACGCGTA
GTATTATGCG GTGGCGACGC GGCTTTTTTT GAAAGTAGCT TGAAACCACC CATCTTTGCG
GTGCCGGAAC TGGTTTTAAT AGGATTGAAC AGAATTTTAA CATATAATGT CTCTTTACAG
TAG
 
Protein sequence
MNIVVDSGNT FSKIGWFEGE KLIRYTTHLD FPELIRNIQA ELPEYLFFSS VGPTQEEFQQ 
ALGASLPVIG LTPDTPLPIV KHYDTPQTLG ADRIAAAAGA NFLFPGEDLV VIDMGTCITY
DVIDRDATFQ GGLISPGVRM RFNAMHTFTK RLPLFEPEKG PELIGKSTRQ AMQSGVMNGT
LAEIEGIIER YRHKYPTLRV VLCGGDAAFF ESSLKPPIFA VPELVLIGLN RILTYNVSLQ